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Mr Andrei Smolnikov

Mr Andrei Smolnikov

Project Officer
  • Bachelor of Advanced Science (Honours) (Class I and The University Medal)
  • Bachelor of Arts (Distinction)
  • Master of Arts (Research)

 

Science
School of Biotech & Biomolecular Science
E-mail
andrei.smolnikov@unsw.edu.au
Location
School of Chemistry
  • Journal articles | 2026
    Su Z; Fang M; Smolnikov A; Vafaee F; Dinger ME; Oates EC, 2026, 'Deep learning of 777 K bulk transcriptomes reveals human–mouse gene conservation beyond DNA sequence similarity', Communications Biology, 9, http://dx.doi.org/10.1038/s42003-026-10189-w
    Journal articles | 2025
    Coppens S; Deconinck N; Sullivan P; Smolnikov A; Clayton JS; Griffin KR; Jones KJ; Vilain CN; Kadhim H; Bryen SJ; Faiz F; Waddell LB; Evesson FJ; Bakshi M; Pinner JR; Charlton A; Brammah S; Graf NS; Krivanek M; Tay CG; Foulds NC; Illingworth MA; Thomas NH; Ellard S; Mazanti I; Park SM; French CE; Brewster J; Belteki G; Hoodbhoy S; Allinson K; Krishnakumar D; Baynam G; Wood BM; Ward M; Vijayakumar K; Syed A; Murugan A; Majumdar A; Scurr IJ; Splitt MP; Moldovan C; de Silva DC; Senanayake K; Gardeitchik T; Arens Y; Cooper ST; Laing NG; Raymond FL; Jungbluth H; Kamsteeg EJ; Manzur A; Corley SM; Ravenscroft G; Wilkins MR; Cowley MJ; Pinese M; Ferreiro A; Richard I; Bönnemann CG; Donkervoort S; Luk HM; Sampaio H; Farrar MA; Mowat D; Fitzsimons RB; Vuillerot C; Phadke R; Davis MR; Muntoni F; Oates EC, 2025, 'Congenital Titinopathy: Comprehensive Characterization of the Most Severe End of the Disease Spectrum', Annals of Neurology, 97, pp. 611 - 628, http://dx.doi.org/10.1002/ana.27087
    Journal articles | 2025
    Johnson R; Fletcher RA; Peters S; Ohanian M; Soka M; Smolnikov A; Abihider KE; Ackerman MJ; Ader F; Akhtar MM; Amin AS; Ashley EA; Atherton JJ; Austin R; Baas AF; Bagnall RD; Ross SB; Blouin JL; Brown EE; Bundgaard H; Cannie D; Chmielewski P; Correnti G; Crespo-Leiro MG; Dal Ferro M; Dellefave-Castillo LM; Dominguez F; Dooijes D; Dybro AM; Ed Demri Y; El Hachmi M; Escobar-Lopez L; Foye SJ; Franaszczyk M; Gigli M; Lopez EG; Goudal A; Graw S; Guipponi M; Haan E; Haas J; Hammersley DJ; Hansen FG; Hayward CS; Hey TM; Heymans S; Ho CY; Houweling AC; Ingles J; Ingrey A; Jabbour A; James PA; Jansweijer JA; Jongbloed JDH; Keogh AM; Larrañaga-Moreira JM; Lekanne Deprez RH; Macciocca I; Macdonald PS; Mansencal N; Mansour J; Martinez-Veira C; Mcdonough B; Mcgaughran J; Medo K; Merlo M; Michalak E; Monserrat L; Mountain H; Muller SA; Murphy AM; Murray B; Oates EC; Ormondroyd E; Pachter N; Paldino A; Palmyre A; Pereira NL; Picard KC; Poplawski N; Prasad S; Proukhnitzky J; Pruny JF; Reant P; Richard P; Ronan A; Sedaghat-Hamedani F; Semsarian C; Storm G; Stroeks S; Syrris P; Taylor MRG; Thomson K; Thompson T; Van Tintelen JP; Vissing CR; Waddell-Smith KE; Wallis M; Zentner D; Arnott C, 2025, 'Titin-related familial dilated cardiomyopathy: factors associated with disease onset', European Heart Journal, 46, pp. 5240 - 5257, http://dx.doi.org/10.1093/eurheartj/ehaf380
    Journal articles | 2025
    Su Z; Fang M; Smolnikov A; Dinger ME; Oates EC; Vafaee F, 2025, 'GeneRAIN: multifaceted representation of genes via deep learning of gene expression networks', Genome Biology, 26, http://dx.doi.org/10.1186/s13059-025-03749-6
    Journal articles | 2025
    Su Z; Fang M; Smolnikov A; Vafaee F; Dinger ME; Oates EC, 2025, 'Post-transcriptional regulation supports the homeostatic expression of mature RNA', Briefings in Bioinformatics, 26, http://dx.doi.org/10.1093/bib/bbaf027
    Journal articles | 2024
    Smolnikov A; Padoani D; Jurczyluk J; Su Z; Hamey J; Wilkins M; Yuen M; Oates E, 2024, '492P Mass spectrometry as a technique for robust quantification of titin and other large muscle disease-associated proteins', Neuromuscular Disorders, 43, pp. 104441.329 - 104441.329, http://dx.doi.org/10.1016/j.nmd.2024.07.338
    Journal articles | 2024
    Töpf A; Cox D; Zaharieva IT; Di Leo V; Sarparanta J; Jonson PH; Sealy IM; Smolnikov A; White RJ; Vihola A; Savarese M; Merteroglu M; Wali N; Laricchia KM; Venturini C; Vroling B; Stenton SL; Cummings BB; Harris E; Marini-Bettolo C; Diaz-Manera J; Henderson M; Barresi R; Duff J; England EM; Patrick J; Al-Husayni S; Biancalana V; Beggs AH; Bodi I; Bommireddipalli S; Bönnemann CG; Cairns A; Chiew MT; Claeys KG; Cooper ST; Davis MR; Donkervoort S; Erasmus CE; Fassad MR; Genetti CA; Grosmann C; Jungbluth H; Kamsteeg EJ; Lornage X; Löscher WN; Malfatti E; Manzur A; Martí P; Mongini TE; Muelas N; Nishikawa A; O’Donnell-Luria A; Ogonuki N; O’Grady GL; O’Heir E; Paquay S; Phadke R; Pletcher BA; Romero NB; Schouten M; Shah S; Smuts I; Sznajer Y; Tasca G; Taylor RW; Tuite A; Van den Bergh P; VanNoy G; Voermans NC; Wanschitz JV; Wraige E; Yoshimura K; Oates EC; Nakagawa O; Nishino I; Laporte J; Vilchez JJ; MacArthur DG; Sarkozy A; Cordell HJ; Udd B; Busch-Nentwich EM; Muntoni F; Straub V, 2024, 'Digenic inheritance involving a muscle-specific protein kinase and the giant titin protein causes a skeletal muscle myopathy', Nature Genetics, 56, pp. 395 - 407, http://dx.doi.org/10.1038/s41588-023-01651-0
    Journal articles | 2023
    Johnson R; Otway R; Chin E; Horvat C; Ohanian M; Wilcox JAL; Su Z; Prestes P; Smolnikov A; Soka M; Guo G; Rath E; Chakravorty S; Chrzanowski L; Hayward CS; Keogh AM; MacDonald PS; Giannoulatou E; Chang ACY; Oates EC; Charchar F; Seidman JG; Seidman CE; Hegde M; Fatkin D, 2023, 'DMD-Associated Dilated Cardiomyopathy: Genotypes, Phenotypes, and Phenocopies', Circulation Genomic and Precision Medicine, 16, pp. 421 - 430, http://dx.doi.org/10.1161/CIRCGEN.123.004221
    Journal articles | 2023
    Khazaal A; Zandavi SM; Smolnikov A; Fatima S; Vafaee F, 2023, 'Pan-Cancer Analysis Reveals Functional Similarity of Three lncRNAs across Multiple Tumors', International Journal of Molecular Sciences, 24, http://dx.doi.org/10.3390/ijms24054796
    Journal articles | 2021
    Smolnikov A; Oates E; Wilkins M, 2021, 'APPLICATION OF NEXT GENERATION TECHNOLOGIES', Neuromuscular Disorders, 31, pp. S145 - S145, http://dx.doi.org/10.1016/j.nmd.2021.07.338
    Journal articles | 2020
    Smolnikov A, 2020, '“Are we not Men?”: Reading the Human-Animal Interface in Science Fiction through John Berger’s “Why Look at Animals?”', New Horizons in English Studies, 4, pp. 157 - 171, http://dx.doi.org/10.17951/nh.2020.5.157-171
    Journal articles | 2018
    Smolnikov A, 2018, '“But the memory remains”: Recollection, globalization, and empire in “Karain”', Conradiana, 50, pp. 115 - 142, http://dx.doi.org/10.1353/cnd.2018.0012
  • Preprints | 2024
    Su Z; Fang M; Smolnikov A; Dinger M; Oates E; Vafaee F, 2024, Multifaceted Representation of Genes via Deep Learning of Gene Expression Networks, http://dx.doi.org/10.1101/2024.03.07.583777
    Preprints | 2024
    Su Z; Fang M; Smolnikov A; Vafaee F; Dinger M; Oates E, 2024, Genes in Humans and Mice: Insights from Deep learning of 777K Bulk Transcriptomes, http://dx.doi.org/10.1101/2024.04.01.587517
    Preprints | 2022
    Khazaal A; Zandavi SM; Smolnikov A; Fatima S; Vafaee F, 2022, Pan-cancer Analyses reveal functional similarities of three lncRNAs across multiple tumors, http://dx.doi.org/10.1101/2022.03.14.22272396
    Conference Abstracts | 2022
    Su Z; Smolnikov A; Khazaal A; Dinger M; Oates E, 2022, 'Comprehensive characterization of early-onset skeletal muscle disease gene exon usage and splicing patterns across different developmental ages', in NEUROMUSCULAR DISORDERS, PERGAMON-ELSEVIER SCIENCE LTD, CANADA, Halifax, Vol. 32, pp. S47 - S47, presented at 27th International Congress of the World-Muscle-Society (WMS), CANADA, Halifax, 11 October 2022 - 15 October 2022, http://dx.doi.org/10.1016/j.nmd.2022.07.027
    Preprints |
    Khazaal A; Zandavi SM; Smolnikov A; Fatima S; Vafee F, Pan-Cancer Analysis Reveals Functional Similarities of Three LncRNAs Across Multiple Tumors, http://dx.doi.org/10.2139/ssrn.4265663

I am a NSW Justice of the Peace and am available to perform JP duties if required. Please send me an email to organise a mutually convenient time.