Dr Frank Po-Yen Lin
Conjoint Senior Lecturer

Dr Frank Po-Yen Lin

2019 - FRACP, Internal Medicine (Medical Oncology), Royal Australasian College of Physicians
2009 - PhD, University of New South Wales (Medical informatics) - Australia
2003 - MB ChB, University of Otago - New Zealand

Medicine & Health
St Vincent's Clinical School
Phone
58985
Location
Level 11, Kinghorn Centre for Clinical Genomics Garvan Institute of Medical Research 370 Victorial Street Darlinghurst, NSW 2010

Publications

  • Book Chapters | 2012
    Dr Frank Po-Yen Lin
    Gallego B; Concha ÓP; Lin FPY; Coiera EW, 2012, 'Exploring the role of pathology test results in the prediction of remaining days of hospitalisation.', in Maeder AJ; Martin Sanchez FJ (ed.), Studies in Health Technology and Informatics, Health Informatics: Building a Healthcare Future Through Trusted Information, IOS Press, Amsterdam, pp. 45 - 50, http://dx.doi.org/10.3233/978-1-61499-078-9-45
  • Journal articles | 2021
    Dr Frank Po-Yen Lin
    Lin FP; Thavaneswaran S; Grady JP; Ballinger M; Kansara M; Oakes SR; Desai J; Lee CK; Simes J; Thomas DM, 2021, 'Criteria-based curation of a therapy-focused compendium to support treatment recommendations in precision oncology', NPJ PRECISION ONCOLOGY, vol. 5, http://dx.doi.org/10.1038/s41698-021-00194-z
    Journal articles | 2019
    Dr Frank Po-Yen Lin
    Lin FP-Y; Jameson MB; Epstein RJ, 2019, 'Predicting survival in advanced cancers by applying machine learning to clinical narratives.', Journal of Global Oncology, vol. 5, pp. 32 - 32, http://dx.doi.org/10.1200/jgo.2019.5.suppl.32
    Journal articles | 2018
    Dr Frank Po-Yen Lin
    Lin FP; Epstein RJ; Groza T; Kocbek S; Antezana E, 2018, 'Cancer care treatment outcome ontology: A novel computable ontology for profiling treatment outcomes in patients with solid tumors', JCO Clinical Cancer Informatics, vol. 2018, pp. 1 - 14, http://dx.doi.org/10.1200/CCI.18.00026
    Journal articles | 2017
    Dr Frank Po-Yen Lin
    Epstein RJ; Lin FP, 2017, 'Cancer and the omics revolution', Australian Family Physician, vol. 46, pp. 189 - 193
    Journal articles | 2017
    Dr Frank Po-Yen Lin
    Lin FPY; Pokorny A; Teng C; Epstein RJ, 2017, 'TEPAPA: A novel in silico feature learning pipeline for mining prognostic and associative factors from text-based electronic medical records', Scientific Reports, vol. 7, http://dx.doi.org/10.1038/s41598-017-07111-0
    Journal articles | 2016
    Dr Frank Po-Yen Lin
    Lin FPY; Pokorny A; Teng C; Dear R; Epstein RJ, 2016, 'Computational prediction of multidisciplinary team decision-making for adjuvant breast cancer drug therapies: A machine learning approach', BMC Cancer, vol. 16, http://dx.doi.org/10.1186/s12885-016-2972-z
    Journal articles | 2016
    Dr Frank Po-Yen Lin
    Tan E; Lin F; Sheck L; Salmon P; Ng S, 2016, 'A practical decision-tree model to predict complexity of reconstructive surgery after periocular basal cell carcinoma excision', Journal of the European Academy of Dermatology and Venereology, http://dx.doi.org/10.1111/jdv.14012
    Journal articles | 2015
    Dr Frank Po-Yen Lin
    Tan E; Lin FPY; Sheck LHN; Salmon PJ; Ng SGJ, 2015, 'Growth of periocular basal cell carcinomas', British Journal of Dermatology, vol. 172, pp. 1002 - 1007, http://dx.doi.org/10.1111/bjd.13470
    Journal articles | 2014
    Dr Frank Po-Yen Lin
    Tsafnat G; Jasch D; Misra A; Choong MK; Lin FY-P; Coiera E, 2014, 'Gene–disease association with literature based enrichment', Journal of Biomedical Informatics, vol. 49, pp. 221 - 226, http://dx.doi.org/10.1016/j.jbi.2014.03.007
    Journal articles | 2013
    Dr Frank Po-Yen Lin
    Sheck LHN; Tan E; Lin FPY; Mortimer NJ; Salmon PJ; Ng SGJ, 2013, 'THE IMPACT OF WAITING TIME FOR ELECTIVE SURGERY ON THE GROWTH OF PERIOCULAR BASAL CELL CARCINOMAS', CLINICAL AND EXPERIMENTAL OPHTHALMOLOGY, vol. 41, pp. 22 - 22, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000329507100032&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
    Journal articles | 2011
    Dr Frank Po-Yen Lin
    Polasek TM; Lin FP; Doogue MP, 2011, 'Clinically relevant information on pharmacokinetic drug-drug interactions', Journal of Pharmacy Practice and Research, vol. 41, pp. 77 - 78
    Journal articles | 2011
    Dr Frank Po-Yen Lin
    Lin FP; Stephen A; Polasek TM; Tsafnat G; Doogue MP, 2011, 'BICEPP: an example-based statistical text mining method for predicting the binary characteristics of drugs', BMC bioinformatics, vol. 12, pp. 112
    Journal articles | 2009
    Dr Frank Po-Yen Lin
    Lin FP; Sintchenko V; Kong F; Gilbert GL; Coiera E, 2009, 'Commonly used molecular epidemiology markers of Streptococcus agalactiae do not appear to predict virulence', Pathology, vol. 41, pp. 576 - 581, http://dx.doi.org/10.1080/00313020903071447
    Journal articles | 2009
    Dr Frank Po-Yen Lin
    Lin FP; Coiera E; Lan R; Sintchenko V, 2009, 'In silico prioritisation of candidate genes for prokaryotic gene function discovery: an application of phylogenetic profiles.', BMC bioinformatics, vol. 10, pp. 86 - 86, http://dx.doi.org/10.1186/1471-2105-10-86
    Journal articles |
    Dr Frank Po-Yen Lin
    Lin FP; Thavaneswaran S; Grady JP; Ballinger M; Kansara M; Oakes SR; Desai J; Lee CK; Simes J; Thomas DM, 'Criteria-based curation of a therapy-focused compendium to support treatment recommendations in precision oncology', , http://dx.doi.org/10.1101/2020.12.18.20248521
  • Conference Abstracts | 2018
    Dr Frank Po-Yen Lin
    Lin FP; Salih OSM; Epstein RJ, 2018, 'EXPLORATORY ANALYSIS OF CLINICAL PROGNOSTIC FACTORS IN PATIENTS WITH ADVANCED CANCER USING COMPUTATIONAL TEXT MINING OF ROUTINE DIGITISED ONCOLOGY CORRESPONDENCE', in INTERNAL MEDICINE JOURNAL, WILEY, Vol. 48, pp. 8 - 8, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000431995500009&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
    Conference Papers | 2018
    Dr Frank Po-Yen Lin
    Lin FPY; Tan ABT, 2018, 'A Signal-Seeking Text Mining Analysis for Identifying Clinical Factors Associated with Treatment Benefit from Pazopanib or Sunitinib in Metastatic Clear Cell Renal Cell Carcinoma', in ASIA-PACIFIC JOURNAL OF CLINICAL ONCOLOGY, WILEY, pp. 38 - 38, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000437670700033&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
    Conference Abstracts | 2017
    Dr Frank Po-Yen Lin
    Lin FP-Y; Groza T; Kocbek S; Antezana E; Epstein RJ, 2017, 'The Cancer Care Treatment Outcomes Ontology (CCTO): A computable ontology for profiling treatment outcomes of patients with solid tumors.', in JOURNAL OF CLINICAL ONCOLOGY, AMER SOC CLINICAL ONCOLOGY, Chicago, IL, Vol. 35, presented at 53rd Annual Clinical Science Meeting of the American-Society-of-Clinical-Oncology (ASCO) / Symposium on Old Targets, New Drugs - Her2 and MET, Chicago, IL, 02 June 2017 - 07 June 2017, http://dx.doi.org/10.1200/JCO.2017.35.15_suppl.e18137
    Conference Abstracts | 2017
    Dr Frank Po-Yen Lin
    Lin FP-Y; Martin C; Kocbek S; Joshua AM; Dear RF-G; Lim E; Chantrill LA; Chin VT; Epstein RJ, 2017, 'Identifying determinants of quality of life in patients undergoing systemic therapy for solid tumors.', in JOURNAL OF CLINICAL ONCOLOGY, AMER SOC CLINICAL ONCOLOGY, Chicago, IL, Vol. 35, presented at 53rd Annual Clinical Science Meeting of the American-Society-of-Clinical-Oncology (ASCO) / Symposium on Old Targets, New Drugs - Her2 and MET, Chicago, IL, 02 June 2017 - 07 June 2017, http://dx.doi.org/10.1200/JCO.2017.35.15_suppl.6596
    Conference Abstracts | 2016
    Dr Frank Po-Yen Lin
    Lin FPY; Pokorny A; Teng C; Dear R; Epstein RJ, 2016, 'AN ALTERNATING DECISION TREE MODEL FOR PREDICTING MULTIDISCIPLINARY TEAM MEETING DECISION ABOUT ADJUVANT CHEMOTHERAPY IN EARLY BREAST CANCER PATIENTS', in ASIA-PACIFIC JOURNAL OF CLINICAL ONCOLOGY, WILEY-BLACKWELL, Vol. 12, pp. 59 - 59, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000380005100043&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
    Conference Papers | 2016
    Dr Frank Po-Yen Lin
    Teng C; Shahid N; Lin FPY; Moylan E, 2016, 'FEASIBILITY OF A RESEARCH PROTOCOL FOR STUDYING PATTERNS OF INVESTIGATION AND TREATMENT FOR BONE COMPLICATIONS IN PATIENTS TREATED WITH AROMATASE INHIBITORS FOR EARLY BREAST CANCER', in ASIA-PACIFIC JOURNAL OF CLINICAL ONCOLOGY, WILEY-BLACKWELL, pp. 132 - 132, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000387769900207&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
    Conference Posters | 2011
    Dr Frank Po-Yen Lin
    Lin FP, 2011, 'Uncovering genes associated with human infections in pathogenic bacteria: a novel integrative analysis linking genome, bibliome, and diseasome', San Francisco, pp. 131, presented at AMIA Translational Bioinformatics Summit, San Francisco, 07 March 2011 - 09 March 2011
    Conference Papers | 2010
    Dr Frank Po-Yen Lin
    Lin FP; Coiera E, 2010, 'A clinical workflow model for facilitating the design and evaluation of computerised clinical decision support systems', in 18th Annual Health Informatics Conference, Health Informatics Society of Australia, Mebourne, pp. 61 - 65, presented at HIC2010: Informing the business of healthcare, Melbourne, 24 August 2010 - 26 August 2010, http://search.informit.com.au/documentSummary;dn=429770463684403;res=IELHEA
    Conference Papers | 2010
    Dr Frank Po-Yen Lin
    Lin FP; Polasek TM; Stephen A; Tsafnat G; Doogue MP, 2010, 'BICEPP: a computational text mining method for predicting binary characteristics of drugs', in BMC Bioinformatics, Melbourne, Australia, pp. 40 - 40, presented at ASCEPT Annual Scientific meeting, Melbourne, Australia, 28 November 2010 - 01 December 2010, http://dx.doi.org/10.1186/1471-2105-12-112
    Conference Papers | 2009
    Dr Frank Po-Yen Lin
    Lin FP, 2009, 'Towards Personalised Pharmacotherapy: A Perspective from Biomedical Informatics', in HIC 2009: Proceedings; Frontiers of Health Informatics - Redefining Healthcare, National Convention Centre Canberra, 19-21 August 2009., Informit (RMIT Publishing), Melbourne, Australia, pp. 57 - 62, presented at HIC2009 Frontiers of Health Informatics - Redefining Healthcare, Canberra, 19 August 2009 - 21 August 2009, http://search.informit.com.au/documentSummary;dn=497482681236702;res=IELHSS
    Conference Papers | 2007
    Dr Frank Po-Yen Lin
    Lin FP, 2007, 'The role of data mining in clinical predictive medicine: a narrative review.', in HIC 2006 Bridging the Digital Divide: Clinician, consumer and computer, HIC 2006 Bridging the Digital Divide: Clinician, consumer and computer, Melbourne, pp. 169 - 174, presented at HIC 2006 Bridging the Digital Divide: Clinician, consumer and computer, Melbourne, 31 July 2007 - 02 August 2007, http://training.informit.com.au/documentSummary;dn=951771578616360;res=IELHSS

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