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Dr Jitendra Jonnagaddala
Senior Research Fellow

Dr Jitendra Jonnagaddala

Medicine & Health
School of Population Health

Research Interests:
Electronic Health Records, Common Data Models, Clinical Prediction Models, Digital Disease Detection

Society Memberships & Professional Activities:

Australasian College of Health Informatics 
International Medical Informatics association
International Society for Disease Surveillance

Specific Research Keywords:
EHR, Digital Health, health informatics, health data science, predictive modeling, outbreak detection, risk assessment, data anonymization

 
E-mail
z3339253@unsw.edu.au
  • Book Chapters | 2018
    2018, 'Translational bioinformatics databases', in Encyclopedia of Bioinformatics and Computational Biology: ABC of Bioinformatics, Elsevier, pp. 1058 - 1062, http://dx.doi.org/10.1016/B978-0-12-809633-8.20303-8
    Book Chapters | 2017
    2017, 'Mining electronic health records to guide and support clinical decision support systems', in Healthcare Ethics and Training: Concepts, Methodologies, Tools, and Applications, IGI Global, pp. 184 - 201, http://dx.doi.org/10.4018/978-1-5225-2237-9.ch008
  • Journal articles | 2023
    2023, 'Artificial intelligence based personalized predictive survival among colorectal cancer patients', Computer Methods and Programs in Biomedicine, 231, http://dx.doi.org/10.1016/j.cmpb.2023.107435
    Journal articles | 2023
    2023, 'Characteristics and outcomes of COVID-19 patients with and without asthma from the United States, South Korea, and Europe', Journal of Asthma, 60, pp. 76 - 86, http://dx.doi.org/10.1080/02770903.2021.2025392
    Journal articles | 2023
    2023, 'Focused Chest Pain Assessment for Early Detection of Acute Coronary Syndrome: Development of a Cardiovascular Digital Health Intervention', Global heart, 17, pp. 18, http://dx.doi.org/10.5334/gh.1194
    Journal articles | 2023
    2023, 'Predicting microsatellite instability and key biomarkers in colorectal cancer from H&E-stained images: achieving state-of-the-art predictive performance with fewer data using Swin Transformer', Journal of Pathology: Clinical Research, 9, pp. 223 - 235, http://dx.doi.org/10.1002/cjp2.312
    Journal articles | 2023
    2023, 'Prognostic Significance of Tumor-Infiltrating Lymphocytes Determined Using LinkNet on Colorectal Cancer Pathology Images.', JCO Precis Oncol, 7, pp. e2200522, http://dx.doi.org/10.1200/PO.22.00522
    Journal articles | 2022
    2022, 'A Machine Learning Model to Predict Length of Stay and Mortality among Diabetes and Hypertension Inpatients', Medicina (Kaunas, Lithuania), 58, pp. 1568 - 1568, http://dx.doi.org/10.3390/medicina58111568
    Journal articles | 2022
    2022, 'A retrospective analysis using deep-learning models for prediction of survival outcome and benefit of adjuvant chemotherapy in stage II/III colorectal cancer', Journal of Cancer Research and Clinical Oncology, 148, pp. 1955 - 1963, http://dx.doi.org/10.1007/s00432-022-03976-5
    Journal articles | 2022
    2022, 'Analysis of Dual Combination Therapies Used in Treatment of Hypertension in a Multinational Cohort', JAMA Network Open, 5, pp. E223877, http://dx.doi.org/10.1001/jamanetworkopen.2022.3877
    Journal articles | 2022
    2022, 'Colorectal Cancer Survival Prediction Using Deep Distribution Based Multiple-Instance Learning', Entropy, 24, http://dx.doi.org/10.3390/e24111669
    Journal articles | 2022
    2022, 'Information Flow and Data Gaps in COVID-19 Recording and Reporting at National and Provincial Levels in Indonesia', Healthcare (Switzerland), 10, http://dx.doi.org/10.3390/healthcare10020204
    Journal articles | 2022
    2022, 'Seek COVER: using a disease proxy to rapidly develop and validate a personalized risk calculator for COVID-19 outcomes in an international network', BMC Medical Research Methodology, 22, pp. 35, http://dx.doi.org/10.1186/s12874-022-01505-z
    Journal articles | 2022
    2022, 'Statin Prescription Patterns and Associations with Subclinical Inflammation', Medicina (Lithuania), 58, pp. 1096 - 1096, http://dx.doi.org/10.3390/medicina58081096
    Journal articles | 2022
    2022, 'Survival prediction in triple negative breast cancer using multiple instance learning of histopathological images', Scientific Reports, 12, pp. 14527, http://dx.doi.org/10.1038/s41598-022-18647-1
    Journal articles | 2022
    2022, 'Towards Equitable and Resilient Digital Primary Care Systems: An International Comparison and Insight for Moving Forward', Yearbook of medical informatics, 31, pp. 47 - 59, http://dx.doi.org/10.1055/s-0042-1742502
    Journal articles | 2021
    2021, 'A Retrospective Analysis using Deep-Learning Models for Prediction of Survival Outcome and Benefit of Adjuvant Chemotherapy in Stage II/III Colorectal Cancer', arXiv, http://dx.doi.org/10.48550/arxiv.2111.03532
    Journal articles | 2021
    2021, 'COVID-19 in patients with autoimmune diseases: characteristics and outcomes in a multinational network of cohorts across three countries', Rheumatology
    Journal articles | 2021
    2021, 'Characteristics and outcomes of over 300,000 patients with COVID-19 and history of cancer in the United States and Spain', Cancer Epidemiology Biomarkers and Prevention, 30, pp. 1884 - 1894, http://dx.doi.org/10.1158/1055-9965.EPI-21-0266
    Journal articles | 2021
    2021, 'Characterizing Dual Combination Therapy Use in Treatment Escalation of Hypertension: Real-World Evidence from Multinational Cohorts', Cold Spring Harbor Laboratory, http://dx.doi.org/10.1101/2021.06.28.21258167
    Journal articles | 2021
    2021, 'Cohort selection for construction of a clinical natural language processing corpus', Computer Methods and Programs in Biomedicine Update, 1, pp. 100024 - 100024, http://dx.doi.org/10.1016/j.cmpbup.2021.100024
    Journal articles | 2021
    2021, 'From telehealth to virtual primary care in Australia? A Rapid Scoping Review', International Journal of Medical Informatics, pp. 104470 - 104470
    Journal articles | 2021
    2021, 'Implementation of the COVID-19 vulnerability index across an international network of health care data sets: Collaborative external validation study', JMIR Medical Informatics, 9, http://dx.doi.org/10.2196/21547
    Journal articles | 2021
    2021, 'Moving with the Times: The Health Science Alliance (HSA) Biobank, Pathway to Sustainability', Biomarker Insights, 16, pp. 1 - 10, http://dx.doi.org/10.1177/11772719211005745
    Journal articles | 2021
    2021, 'Predicting length of stay and mortality among hospitalized patients with type 2 diabetes mellitus and hypertension', International Journal of Medical Informatics, 154, http://dx.doi.org/10.1016/j.ijmedinf.2021.104569
    Journal articles | 2021
    2021, 'Primary Care Informatics Response to Covid-19 Pandemic: Adaptation, Progress, and Lessons from Four Countries with High ICT Development', Yearbook of Medical Informatics
    Journal articles | 2021
    2021, 'Quality assessment of real-world data repositories across the data life cycle: A literature review', Journal of the American Medical Informatics Association, http://dx.doi.org/10.1093/jamia/ocaa340
    Journal articles | 2021
    2021, 'Radical collaboration during a global health emergency: Development of the RDA COVID-19 data sharing recommendations and guidelines', Open Research Europe, 1, pp. 69 - 69, http://dx.doi.org/10.12688/openreseurope.13369.1
    Journal articles | 2021
    2021, 'The OpenDeID corpus for patient de-identification', Scientific Reports, 11, http://dx.doi.org/10.1038/s41598-021-99554-9
    Journal articles | 2021
    2021, 'Use of repurposed and adjuvant drugs in hospital patients with covid-19: Multinational network cohort study', The BMJ, 373, http://dx.doi.org/10.1136/bmj.n1038
    Journal articles | 2020
    2020, 'Adoption of enterprise architecture for healthcare in AeHIN member countries', BMJ Health and Care Informatics, 27, http://dx.doi.org/10.1136/bmjhci-2020-100136
    Journal articles | 2020
    2020, 'Baseline phenotype and 30-day outcomes of people tested for COVID-19: an international network cohort including >3.32 million people tested with real-time PCR and >219,000 tested positive for SARS-CoV-2 in South Korea, Spain and the United States.', medRxiv, http://dx.doi.org/10.1101/2020.10.25.20218875
    Journal articles | 2020
    2020, 'Can we trust the prediction model? Demonstrating the importance of external validation by investigating the COVID-19 Vulnerability (C-19) Index across an international network of observational healthcare datasets', medRxiv
    Journal articles | 2020
    2020, 'Clinical characteristics, symptoms, management and health outcomes in 8,598 pregnant women diagnosed with COVID-19 compared to 27,510 with seasonal influenza in France, Spain and the US: a network cohort analysis', medRxiv, http://dx.doi.org/10.1101/2020.10.13.20211821
    Journal articles | 2020
    2020, 'Cohort Selection for Clinical Trials Using Multiple Instance Learning', Journal of Biomedical Informatics, 107, pp. 103438 - 103438, http://dx.doi.org/10.1016/j.jbi.2020.103438
    Journal articles | 2020
    2020, 'Crowdsourcing digital health measures to predict Parkinson’s disease severity: the Parkinson’s Disease Digital Biomarker DREAM Challenge', npj Digital Medicine
    Journal articles | 2020
    2020, 'Ethical Use of Electronic Health Record Data and Artificial Intelligence: Recommendations of the Primary Care Informatics Working Group of the International Medical Informatics Association', Yearbook of Medical Informatics
    Journal articles | 2020
    2020, 'Family history information extraction with neural attention and an enhanced relation-side scheme: Algorithm development and validation', JMIR Medical Informatics, 8, pp. e21750, http://dx.doi.org/10.2196/21750
    Journal articles | 2020
    2020, 'Heterogeneity and temporal variation in the management of COVID-19: a multinational drug utilization study including 71,921 hospitalized patients from China, South Korea, Spain, and the United States of America', medRxiv, http://dx.doi.org/10.1101/2020.09.15.20195545
    Journal articles | 2020
    2020, 'Seek COVER: Development and validation of a personalized risk calculator for COVID-19 outcomes in an international network', medRxiv
    Journal articles | 2020
    2020, 'Whole slide images based cancer survival prediction using attention guided deep multiple instance learning networks', Medical Image Analysis, 65, http://dx.doi.org/10.1016/j.media.2020.101789
    Journal articles | 2020
    2020, 'mHealth for Integrated People-Centred Health Services in the Western Pacific: A Systematic Review', International Journal of Medical Informatics, 142, pp. 104259 - 104259, http://dx.doi.org/10.1016/j.ijmedinf.2020.104259
    Journal articles | 2019
    2019, 'Artificial Intelligence in Primary Health Care: Perceptions, Issues, and Challenges', Yearbook of medical informatics, 28, pp. 041 - 046, http://dx.doi.org/10.1055/s-0039-1677901
    Journal articles | 2019
    2019, 'Causal Relationships Among Pollen Counts, Tweet Numbers, and Patient Numbers for Seasonal Allergic Rhinitis Surveillance: Retrospective Analysis.', J Med Internet Res, 21, pp. e10450, http://dx.doi.org/10.2196/10450
    Journal articles | 2019
    2019, 'Comparison of the cohort selection performance of Australian Medicines Terminology to Anatomical Therapeutic Chemical mappings', Journal of the American Medical Informatics Association, 26, pp. 1237 - 1246, http://dx.doi.org/10.1093/jamia/ocz143
    Journal articles | 2019
    2019, 'Statistical principle-based approach for recognizing and normalizing microRNAs described in scientific literature', Database, 2019, http://dx.doi.org/10.1093/database/baz030
    Journal articles | 2019
    2019, 'Statistical supervised meta-ensemble algorithm for medical record linkage', Journal of biomedical informatics, 95, pp. 103220 - 103220, http://dx.doi.org/10.1016/j.jbi.2019.103220
    Journal articles | 2018
    2018, 'Assessing the severity of positive valence symptoms in initial psychiatric evaluation records: Should we use convolutional neural networks?', PloS one, 13, pp. e0204493 - e0204493, http://dx.doi.org/10.1371/journal.pone.0204493
    Journal articles | 2018
    2018, 'Behavior Change for Youth Drivers: Design and Development of a Smartphone-Based App (BackPocketDriver).', JMIR Form Res, 2, pp. e25, http://dx.doi.org/10.2196/formative.9660
    Journal articles | 2018
    2018, 'Enhanced Functionalities for Annotating and Indexing Clinical Text with the NCBO Annotator+', Bioinformatics, 34, pp. 1962 - 1965, http://dx.doi.org/10.1093/bioinformatics/bty009
    Journal articles | 2017
    2017, 'Exploring associations of clinical and social parameters with violent behaviors among psychiatric patients', Journal of biomedical informatics, 75, pp. S149 - S159, http://dx.doi.org/10.1016/j.jbi.2017.08.009
    Journal articles | 2017
    2017, 'Patient-Specific Predictive Modeling Using Random Forests: An Observational Study for the Critically Ill.', JMIR Med Inform, 5, pp. e3, http://dx.doi.org/10.2196/medinform.6690
    Journal articles | 2016
    Dai H-J; Singh O; Jonnagaddala J; Su EC-Y, 2016, 'NTTMUNSW BioC modules for recognizing and normalizing species and gene/protein mentions', Database, 2016, pp. baw111 - baw111
    Journal articles | 2016
    2016, 'BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID', Database, 2016, http://dx.doi.org/10.1093/database/baw121
    Journal articles | 2016
    2016, 'Feature engineering for recognizing adverse drug reactions from twitter posts', Information, 7, pp. 27 - 27, http://dx.doi.org/10.3390/info7020027
    Journal articles | 2016
    2016, 'Improving the dictionary lookup approach for disease normalization using enhanced dictionary and query expansion', Database, 2016, http://dx.doi.org/10.1093/database/baw112
    Journal articles | 2016
    2016, 'MET network in PubMed: a text-mined network visualization and curation system', Database, 2016, http://dx.doi.org/10.1093/database/baw090
    Journal articles | 2015
    2015, 'A context-aware approach for progression tracking of medical concepts in electronic medical records', Journal of biomedical informatics, 58, pp. S150 - S157, http://dx.doi.org/10.1016/j.jbi.2015.09.013
    Journal articles | 2015
    2015, 'Coronary artery disease risk assessment from unstructured electronic health records using text mining', Journal of biomedical informatics, 58, pp. S203 - S210, http://dx.doi.org/10.1016/j.jbi.2015.08.003
    Journal articles | 2015
    2015, 'Identification and progression of heart disease risk factors in diabetic patients from longitudinal electronic health records.', BioMed Research International, 2015, http://dx.doi.org/10.1155/2015/636371
    Journal articles | 2014
    Jonnagaddala J; Jue TR; Ray P; Talaei-Khoei A, 2014, 'Data Sharing Challenges and Recommendations for Human Biorepositories: A Systematic Literature Review', The International Technology Management Review, 4, pp. 68 - 77
    Journal articles | 2014
    2014, 'Assessing video games to improve driving skills: a literature review and observational study', JMIR serious games, 2, pp. e5 - e5, http://dx.doi.org/10.2196/games.3274
  • Preprints | 2023
    2023, Time to Embrace Natural Language Processing (NLP)-based Digital Pathology: Benchmarking NLP- and Convolutional Neural Network-based Deep Learning Pipelines, , http://dx.doi.org/10.48550/arxiv.2302.10406
    Preprints | 2022
    2022, Colorectal cancer survival prediction using deep distribution based multiple-instance learning, , http://dx.doi.org/10.48550/arxiv.2204.11294
    Reports | 2022
    2022, Digital health and universal health coverage: opportunities and policy considerations for Pacific Island health authorities, WHO, New Delhi, India, https://apo.who.int/publications/i/item/digital-health-and-universal-health-coverage-opportunities-and-policy-considerations-for-pacific-island-health-authorities
    Preprints | 2022
    2022, Predicting microsatellite instability and key biomarkers in colorectal cancer from H&E-stained images: Achieving SOTA predictive performance with fewer data using Swin Transformer, , http://dx.doi.org/10.48550/arxiv.2208.10495
    Preprints | 2022
    2022, Prognostic Significance of Tumor-Infiltrating Lymphocytes Using Deep Learning on Pathology Images in Colorectal Cancers, , http://dx.doi.org/10.48550/arxiv.2208.11518
    Conference Abstracts | 2021
    2021, 'Abstract 14094: Characterizing Dual Combination Therapy Use In Treatment Escalation Of Hypertension: Real-world Evidence From Multinational Cohorts', in Circulation, Ovid Technologies (Wolters Kluwer Health), Vol. 144, pp. a14094 - a14094, http://dx.doi.org/10.1161/circ.144.suppl_1.14094
    Conference Papers | 2021
    2021, 'Heterogeneity and temporal variation in the management of COVID-19: A multinational drug utilisation study including 274,719 hospitalised patients from, the United States of America, China, Spain, and South Korea', in PHARMACOEPIDEMIOLOGY AND DRUG SAFETY, WILEY, pp. 78 - 79, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000687807300157&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
    Preprints | 2021
    2021, Characterization of long-term patient-reported symptoms of COVID-19: an analysis of social media data, , http://dx.doi.org/10.1101/2021.07.13.21260449
    Conference Papers | 2020
    2020, 'Characterizing database granularity using SNOMED-CT hierarchy', in AMIA ... Annual Symposium proceedings. AMIA Symposium, AMIA, pp. 983 - 992, http://knowledge.amia.org/72332-amia-1.4602255
    Conference Papers | 2020
    2020, 'Graph Attention Multi-instance Learning for Accurate Colorectal Cancer Staging', in Martel AL; Abolmaesumi P; Stoyanov D; Mateus D; Zuluaga MA; Zhou SK; Racoceanu D; Joskowicz L (eds.), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Springer, pp. 529 - 539, http://dx.doi.org/10.1007/978-3-030-59722-1_51
    Conference Papers | 2019
    2019, 'Generation of Surrogates for De-Identification of Electronic Health Records.', in MedInfo, Lyon, France, pp. 70 - 73, presented at MedInfo, Lyon, France, 25 August 2019 - 30 August 2019, http://dx.doi.org/10.3233/SHTI190185
    Conference Abstracts | 2019
    2019, 'Opioids in general practice: use or abuse', in AUSTRALIAN JOURNAL OF PRIMARY HEALTH, CSIRO PUBLISHING UNIPARK, BLDG 1, LEVEL 1, 195 WELLINGTON RD, LOCKED BAG 10 …, Vol. 25, pp. XXXII - XXXIII, CSIRO PUBLISHING UNIPARK, BLDG 1, LEVEL 1, 195 WELLINGTON RD, LOCKED BAG 10 …
    Conference Abstracts | 2019
    2019, 'Use of mHealth to promote healthy ageing and support delivery of age-friendly health and long-term care services - A systematic review', International Foundation for Integrated Care, San Sebastian, Spain, presented at 19th International Conference on Integrated Care, San Sebastian, Spain, 01 April 2019 - 03 April 2019, https://integratedcarefoundation.org/events/icic19-19th-international-conference-on-integrated-care-san-sebastian-basque-country
    Reports | 2019
    2019, A review of the use of mHealth to promote healthy ageing and support the delivery of age-friendly health care services in the Western Pacific Region
    Conference Papers | 2018
    Chang N-W; Jonnagaddala J; Wang F-D; Dai H-J, 2018, 'A study on identification of organism and micro-RNA mentions in figure captions', in Proceedings of the BioCreative VI Challenge and Workshop (October 18–20). DoubleTree by Hilton Hotel, Bethesda, Maryland, USA, pp. 28 - 31
    Conference Papers | 2018
    Chen A; Zhang Y; Jonnagaddala J, 2018, 'Action tremor detection in Parkinson’s disease patients using smartphone based sensor data', in 2017 Parkinson’s Disease Digital Biomarker DREAM Challenge, 2017 Parkinson’s Disease Digital Biomarker DREAM Challenge, http://doi.org/10.7303/syn11423921, presented at 2017 Parkinson’s Disease Digital Biomarker DREAM Challenge, http://doi.org/10.7303/syn11423921, 19 November 2018 - 19 June 2018, http://dx.doi.org/10.7303/syn11423921
    Conference Papers | 2018
    Chen EZ-Y; Singh O; Jue TR; Wang C-K; Jonnagaddala J; Dai H-J, 2018, 'Identifying Mutation-induced Protein-Protein Interactions in Scientific Literature', in Proceedings of the BioCreative VI Challenge Evaluation Workshop
    Conference Papers | 2018
    2018, 'Common Data Models (CDMs) to Enhance International Big Data Analytics: A Diabetes Use Case to Compare Three CDMs.', in EFMI-STC, pp. 60 - 64, http://dx.doi.org/10.3233/978-1-61499-921-8-60
    Conference Abstracts | 2018
    2018, 'mHealth for integrated service delivery in the Western Pacific Region: A Systematic Review', Colombo, Sri Lanka, presented at 10th Biennial Conference of the Asia Pacific Association for Medical Informatics (APAMI 2018), Colombo, Sri Lanka, 09 October 2018 - 11 October 2018, http://dhw2018.org/apami2018/download/2588/
    Conference Papers | 2017
    Adam DC; Jonnagaddala J; Han-Chen D; Batongbacal S; Almeida L; Zhu JZ; Yang JJ; Mundekkat JM; Badman S; Chughtai A; others , 2017, 'ZikaHack 2016: A digital disease detection competition', in Proceedings of the International Workshop on Digital Disease Detection using Social Media 2017 (DDDSM-2017), The 8th International Joint Conference on Natural Language Processing (IJCNLP 2017)., Taipei, Taiwan, pp. 39 - 46, presented at The 8th International Joint Conference on Natural Language Processing (IJCNLP 2017)., Taipei, Taiwan, 27 November 2017 - 01 December 2017, https://aclanthology.info/papers/W17-5806/w17-5806
    Conference Papers | 2017
    Huang Y-J; Su CH; Chang Y-C; Ting T-H; Fu T-Y; Wang R-M; Dai H-J; Chang Y-C; Jonnagaddala J; Hsu W-L, 2017, 'Incorporating dependency trees improve identification of pregnant women on social media platforms', in Proceedings of the International Workshop on Digital Disease Detection using Social Media 2017 (DDDSM-2017), The 8th International Joint Conference on Natural Language Processing (IJCNLP 2017)., Taipei, Taiwan, pp. 26 - 32, presented at The 8th International Joint Conference on Natural Language Processing (IJCNLP 2017)., Taipei, Taiwan, 27 November 2017 - 01 December 2017, https://aclanthology.info/papers/W17-5804/w17-5804
    Conference Papers | 2017
    Jonnagaddala J; Dai H-J; Wang C-K; Lai P-T, 2017, 'Performance and interoperability assessment of Disease Extract Annotation Server (DEAS)', in Proceedings of the BioCreative V.5 Challenge Evaluation Workshop, Barcelona, Spain, April 26-27, 2017, BioCreative V.5 Challenge Evaluation Workshop,, Barcelona, Spain,, presented at BioCreative V.5 Challenge Evaluation Workshop,, Barcelona, Spain,, 26 April 2017 - 27 April 2017, http://www.biocreative.org/media/store/files/2017/BioCreative_V5_paper21.pdf
    Conference Papers | 2017
    2017, 'Automatic coding of death certificates to ICD-10 terminology', in In Working Notes of CLEF 2017 - Conference and Labs of the Evaluation forum, Dublin, Ireland, September 11-14, 2017, CLEF, CLEF
    Conference Papers | 2017
    2017, 'Introduction', in DDDSM 2017 - 1st International Workshop on Digital Disease Detection using Social Media, Proceedings of the Workshop, pp. iii
    Conference Proceedings (Editor of) | 2017
    Jonnagaddala , (ed.), 2017, 'Proceedings of the International Workshop on Digital Disease Detection using Social Media 2017 (DDDSM-2017)', The 8th International Joint Conference on Natural Language Processing (IJCNLP 2017)., presented at The 8th International Joint Conference on Natural Language Processing (IJCNLP 2017)., 27 November 2017 - 01 December 2017, https://aclanthology.info/volumes/proceedings-of-the-international-workshop-on-digital-disease-detection-using-social-media-2017-dddsm-2017
    Conference Papers | 2016
    Jonnagaddala J; Jue TR; Dai H-J, 2016, 'Binary classification of Twitter posts for adverse drug reactions', in Proceedings of the Social Media Mining Shared Task Workshop at the Pacific Symposium on Biocomputing
    Conference Papers | 2016
    2016, 'Integration and Analysis of Heterogeneous Colorectal Cancer Data for Translational Research', in Nursing Informatics 2016, pp. 387 - 387, http://dx.doi.org/10.3233/978-1-61499-658-3-387
    Reports | 2016
    2016, Sydney Statement on Employee Health and Well-being
    Conference Papers | 2015
    Jonnagaddala J; Chang N-W; Jue TR; Dai H-J, 2015, 'Recognition and normalization of disease mentions in PubMed abstracts', in Proceedings of the fifth BioCreative challenge evaluation workshop, Sevilla, Spain, September 9-11, 2015.
    Conference Abstracts | 2015
    Jonnagaddala J; Croucher JL; Meagher NS; Kumar M; Caruso L; Jue TR; London J; Ward RL; Hawkins NJ, 2015, 'Supporting translational research: Accessing colorectal cancer research data', in Australian Open Research Data Showcase, Canberra, Australia
    Conference Papers | 2015
    Jonnagaddala J; Dai H-J; Ray P; Liaw S-T, 2015, 'A preliminary study on automatic identification of patient smoking status in unstructured electronic health records', in Proceedings of BioNLP 15, pp. 147 - 151
    Conference Papers | 2015
    Jonnagaddala J; Liaw S-T; Rayb P; Kumarc M; Dai H-J, 2015, 'TMUNSW: Identification of disorders and normalization to SNOMED-CT terminology in unstructured clinical notes', in 9th International Workshop on Semantic Evaluations.
    Conference Papers | 2015
    2015, 'Impact of data quality assessment on development of clinical predictive models.', in Studies in health technology and informatics, pp. 1069 - 1069, http://dx.doi.org/10.3233/978-1-61499-564-7-1069
    Conference Papers | 2015
    2015, 'Utilizing different word representation methods for twitter data in adverse drug reactions extraction', in 2015 Conference on Technologies and Applications of Artificial Intelligence (TAAI), IEEE, pp. 260 - 265, IEEE, http://dx.doi.org/10.1109/TAAI.2015.7407070
    Conference Papers | 2014
    Jonnagaddala J; Kumar M; Dai H-J; Rachmani E; Hsu C-Y, 2014, 'TMUNSW: Disorder Concept Recognition and Normalization in Clinical Notes for SemEval-2014 Task 7', in 8th International Workshop on Semantic Evaluation (SemEval 2014), Dublin, Ireland, August 23-24, 2014., ACL Anthology, pp. 663 - 667, ACL Anthology
    Conference Abstracts | 2014
    Meagher NS; Scott G; Hettiaratchi A; Schwensen J; Jonnagaddala J; Caruso L; Ward RL; Crowe P; Salisbury E; Liauw W; others , 2014, 'Two years, fifteen hundred consents and counting. Integrating the HSA Biobank within routine clinical practice within the SESLHD.', in Innovations in Cancer Treatment and Care, Sydney, Australia, 17 October 2014.
    Conference Abstracts | 2014
    Sue D; Ray P; Talaei-Khoei A; Jonnagaddala J, 2014, 'An initial proof of concept for Xbox Kinect as an alternative technology designed to improve driving performance of seniors', in 9th World Conference of Gerontechnology (ISG 2014), Taipei, Taiwan, June 18-21, 2014., Vol. 13, pp. 283 - 283, http://dx.doi.org/10.4017/gt.2014.13.02.417.00
    Conference Papers | 2014
    2014, 'HTNSystem: Hypertension Information Extraction System for Unstructured Clinical Notes', in Technologies and Applications of Artificial Intelligence, Taipei, Taiwan, 21-23 November 2014, Springer International Publishing, pp. 219 - 227, Springer International Publishing
    Reports | 2013
    Jonnagaddala J; Sue D, 2013, A Report on the Workshop on Biobanking Informatics
    Conference Papers | 2013
    2013, 'Evaluation of caBIG¯ caTissue Software', in World Congress on Medical Physics and Biomedical Engineering May 26-31, 2012, Beijing, China, Springer, Berlin, Heidelberg, pp. 1592 - 1595, Springer, Berlin, Heidelberg, http://dx.doi.org/10.1007/978-3-642-29305-4_418

My Research Supervision

Mifetika Lukitasari   (PhD - Primary )

Shagoofa Rakhshanda (PhD - Primary )

Ze Yu Yeo ( Medicine honours - Primary )

Jiayue Wang ( Masters - Joint)