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Lecturer

Dr Josie van Dorst

Medicine & Health
School of Clinical Medicine
Phone
0410757447
  • Book Chapters | 2017
    van Dorst J; Benaud N; Ferrari B, 2017, 'New insights into the microbial diversity of polar desert soils: A biotechnological perspective', in Microbial Ecology of Extreme Environments, Springer, pp. 169 - 183, http://dx.doi.org/10.1007/978-3-319-51686-8_7
    Book Chapters | 2011
    Ferrari BC; Winsley T; Van dorst J; Bergquist P, 2011, 'Flow Cytometry in Environmental Microbiology: A rapid approach for the isolation of single-cells for advanced molecular biology analysis', in Navid A (ed.), Microbial Systems Biology: Methods and Protocols. Methods in Molecular Biology Series, Humana Press, Inc., pp. 3 - 26, http://dx.doi.org/10.1007/978-1-61779-827-6-1
  • Journal articles | 2023
    McKay I; van Dorst J; Katz T; Doumit M; Prentice B; Owens L; Belessis Y; Chuang S; Jaffe A; Thomas T; Coffey M; Ooi CY, 2023, 'Diet and the gut-lung axis in cystic fibrosis–direct & indirect links', Gut Microbes, 15, pp. 2156254, http://dx.doi.org/10.1080/19490976.2022.2156254
    Journal articles | 2023
    Taylor N; Sivam S; Halim J; Visser S; Dunn A; Volovets A; Haber P; Van Dorst J; Ooi KCY, 2023, 'P294 Colorectal cancer screening in cystic fibrosis, what can iFOBT tell us?', Journal of Cystic Fibrosis, 22, pp. S155 - S155, http://dx.doi.org/10.1016/s1569-1993(23)00665-3
    Journal articles | 2023
    Wrigley-Carr HE; van Dorst JM; Ooi CY, 2023, 'P281 Children with cystic fibrosis demonstrate high rates of asymptomatic carriage of Clostridioides difficile', Journal of Cystic Fibrosis, 22, pp. S151 - S151, http://dx.doi.org/10.1016/s1569-1993(23)00653-7
    Journal articles | 2023
    van Dorst J; Waters S; Allan K; Thomas T; Jaffe A; Ooi KCY, 2023, 'WS08.06 Pilot study evaluating the potential of Akkermansia muciniphila and Faecalibacterium prausnitzii as cystic fibrosis-specific probiotics utilising patient-derived organoid models', Journal of Cystic Fibrosis, 22, pp. S17 - S18, http://dx.doi.org/10.1016/s1569-1993(23)00234-5
    Journal articles | 2022
    Tam RY; van Dorst JM; McKay I; Coffey M; Ooi CY, 2022, 'Intestinal Inflammation and Alterations in the Gut Microbiota in Cystic Fibrosis: A Review of the Current Evidence, Pathophysiology and Future Directions', Journal of Clinical Medicine, 11, http://dx.doi.org/10.3390/jcm11030649
    Journal articles | 2022
    Wrigley-Carr HE; van Dorst JM; Ooi CY, 2022, 'Intestinal dysbiosis and inflammation in cystic fibrosis impacts gut and multi-organ axes', Medicine in Microecology, 13, pp. 100057 - 100057, http://dx.doi.org/10.1016/j.medmic.2022.100057
    Journal articles | 2022
    van Dorst JM; Tam RY; Ooi CY, 2022, 'What Do We Know about the Microbiome in Cystic Fibrosis? Is There a Role for Probiotics and Prebiotics?', Nutrients, 14, http://dx.doi.org/10.3390/nu14030480
    Journal articles | 2021
    van Dorst J; Wilkins D; Crane S; Montgomery K; Zhang E; Spedding T; Hince G; Ferrari B, 2021, 'Microbial community analysis of biopiles in Antarctica provides evidence of successful hydrocarbon biodegradation and initial soil ecosystem recovery', Environmental Pollution, 290, http://dx.doi.org/10.1016/j.envpol.2021.117977
    Journal articles | 2020
    Ruprecht JE; Glamore WC; Dafforn KA; Wemheuer F; Crane SL; van Dorst J; Johnston EL; Mitrovic SM; Turner IL; Ferrari BC; Birrer SC, 2020, 'A novel real-world ecotoxicological dataset of pelagic microbial community responses to wastewater', Scientific Data, 7, pp. 158, http://dx.doi.org/10.1038/s41597-020-0496-5
    Journal articles | 2020
    Zhang E; Thibaut LM; Terauds A; Raven M; Tanaka MM; Van Dorst J; Wong SY; Crane S; Ferrari BC, 2020, 'Lifting the veil on arid-to-hyperarid Antarctic soil microbiomes: A tale of two oases', Microbiome, 8, pp. 37, http://dx.doi.org/10.1186/s40168-020-00809-w
    Journal articles | 2020
    van Dorst J; Wilkins D; King CK; Spedding T; Hince G; Zhang E; Crane S; Ferrari B, 2020, 'Applying microbial indicators of hydrocarbon toxicity to contaminated sites undergoing bioremediation on subantarctic Macquarie Island', Environmental Pollution, 259, http://dx.doi.org/10.1016/j.envpol.2019.113780
    Journal articles | 2019
    Benaud N; Zhang E; Van Dorst J; Brown MV; Kalaitzis JA; Neilan BA; Ferrari BC, 2019, 'Harnessing long-read amplicon sequencing to uncover NRPS and Type i PKS gene sequence diversity in polar desert soils', FEMS Microbiology Ecology, 95, http://dx.doi.org/10.1093/femsec/fiz031
    Journal articles | 2019
    Zhang E; Thibaut L; Terauds A; Wong S; van Dorst J; Tanaka M; Ferrari B, 2019, 'Extreme niche partitioning promotes a remarkably high diversity of soil microbiomes across eastern Antarctica', , http://dx.doi.org/10.1101/559666
    Journal articles | 2018
    Crane SL; van Dorst J; Hose GC; King CK; Ferrari BC, 2018, 'Microfluidic qPCR Enables high throughput quantification of microbial functional genes but requires strict curation of primers', Frontiers in Environmental Science, 6, http://dx.doi.org/10.3389/fenvs.2018.00145
    Journal articles | 2017
    Ji M; Greening C; Vanwonterghem I; Carere CR; Bay SK; Steen JA; Montgomery K; Lines T; Beardall J; Van Dorst J; Snape I; Stott MB; Hugenholtz P; Ferrari BC, 2017, 'Atmospheric trace gases support primary production in Antarctic desert surface soil', Nature, 552, pp. 400 - 403, http://dx.doi.org/10.1038/nature25014
    Journal articles | 2017
    Pudasaini S; Wilson J; Ji M; van Dorst J; Snape I; Palmer AS; Burns BP; Ferrari BC, 2017, 'Microbial diversity of browning Peninsula, Eastern Antarctica revealed using molecular and cultivation methods', Frontiers in Microbiology, 8, http://dx.doi.org/10.3389/fmicb.2017.00591
    Journal articles | 2016
    Ferrari BC; Bissett A; Snape I; van Dorst J; Palmer AS; Ji M; Siciliano SD; Stark JS; Winsley T; Brown MV, 2016, 'Geological connectivity drives microbial community structure and connectivity in polar, terrestrial ecosystems', Environmental microbiology, 18, pp. 1834 - 1849, http://dx.doi.org/10.1111/1462-2920.13034
    Journal articles | 2016
    Ji M; van Dorst J; Bissett A; Brown MV; Palmer AS; Snape I; Siciliano SD; Ferrari BC, 2016, 'Microbial diversity at Mitchell Peninsula, Eastern Antarctica: a potential biodiversity “hotspot”', Polar Biology, 39, pp. 237 - 249, http://dx.doi.org/10.1007/s00300-015-1776-y
    Journal articles | 2016
    Van Dorst JM; Hince G; Snape I; Ferrari BC, 2016, 'Novel Culturing Techniques Select for Heterotrophs and Hydrocarbon Degraders in a Subantarctic Soil', Scientific Reports, 6, http://dx.doi.org/10.1038/srep36724
    Journal articles | 2014
    Dorst JV; Siciliano SD; Winsley T; Snape I; Ferrari BC, 2014, 'Bacterial targets as potential indicators of diesel fuel toxicity in subantarctic soils', Applied and Environmental Microbiology, 80, pp. 4021 - 4033, http://dx.doi.org/10.1128/AEM.03939-13
    Journal articles | 2014
    Siciliano SD; Palmer AS; Winsley T; Lamb E; Bissett A; Brown MV; van Dorst J; Ji M; Ferrari BC; Grogan P; Chu H; Snape I, 2014, 'Soil fertility is associated with fungal and bacterial richness, whereas pH is associated with community composition in polar soil microbial communities', Soil Biology and Biochemistry, 78, pp. 10 - 20, http://dx.doi.org/10.1016/j.soilbio.2014.07.005
    Journal articles | 2014
    Winsley TJ; Snape I; McKinlay J; Stark J; van Dorst JM; Ji M; Ferrari BC; Siciliano SD, 2014, 'The ecological controls on the prevalence of candidate division TM7 in polar regions', Frontiers in Microbiology, 5, http://dx.doi.org/10.3389/fmicb.2014.00345
    Journal articles | 2014
    van Dorst J; Bissett A; Palmer AS; Brown M; Snape I; Stark JS; Raymond B; McKinlay J; Ji M; Winsley T; Ferrari BC, 2014, 'Community fingerprinting in a sequencing world', FEMS Microbiology Ecology, 89, pp. 316 - 330, http://dx.doi.org/10.1111/1574-6941.12308
    Journal articles | 2012
    Ferrari BC; Winsley T; Bergquist P; van Dorst JM, 2012, 'Flow cytometry in environmental microbiology: a rapid approach for the isolation of single cells for advanced molecular biology analysis.', Methods in Molecular Biology, 881, pp. 3 - 26, http://dx.doi.org/10.1007/978-1-61779-827-6_1
    Journal articles | 2012
    Winsley T; van Dorst JM; Brown MV; Ferrari BC, 2012, 'Capturing greater 16S rRNA gene sequence diversity within the domain bacteria', Applied and Environmental Microbiology, 78, pp. 5938 - 5941, http://dx.doi.org/10.1128/AEM.01299-12
    Journal articles | 2011
    Ferrari BC; Zhang C; van Dorst J, 2011, 'Recovering greater fungal diversity from pristine and diesel fuel contaminated sub-antarctic soil through cultivation using both a high and a low nutrient media approach', Frontiers in Microbiology, 2, http://dx.doi.org/10.3389/fmicb.2011.00217
  • Conference Presentations | 2021
    van Dorst J; McKay I; Coffey M; Doumit M; Paida K; Jaffe A; Thomas T; Katz T; Ooi CY, 2021, 'WS02.4 Evaluating the role of short chain fatty acids in cystic fibrosis', Vol. 20, pp. S4 - S4, http://dx.doi.org/10.1016/s1569-1993(21)00924-3
    Conference Presentations | 2020
    van Dorst J; McKay I; Coffey M; Doumit M; Bramley L; Paida K; Jaffe A; Thomas T; Katz T; Ooi CY, 2020, 'WS03.6 Does the cystic fibrosis diet contribute to intestinal dysbiosis?', Vol. 19, pp. S6 - S6, http://dx.doi.org/10.1016/s1569-1993(20)30182-x