Hu M; Lee M; Zhong L; Manefield MJ, 2019, 'Method Development for DNA and Proteome SIP Analysis of Activated Sludge for Anaerobic Dichloromethane Biodegradation', in Stable Isotope Probing, United States, pp. 207 - 219, http://dx.doi.org/10.1007/978-1-4939-9721-3_16
Book Chapters | 2018
Cheema S; Zhang M; Labine-Romain M; Lal B; Lavania M; Lee M; Li X; Lauro FM; Beckmann S; Manefield M, 2018, 'Neutral red: The synthetic phenazine full of electrochemical surprises', in Encyclopedia of Interfacial Chemistry: Surface Science and Electrochemistry, pp. 382 - 391, http://dx.doi.org/10.1016/B978-0-12-409547-2.14291-X
Book Chapters | 2017
Manefield M; Alfan-Guzman R; Lee M, 2017, 'Anaerobic bioreactors for the treatment of chlorinated hydrocarbons', in Thangadurai D; Sangeetha J(ed.), Industrial Biotechnology: Sustainable Production and Bioresource Utilization, CRC Press Taylor & Francis Group, pp. 421 - 452
Book Chapters | 2017
Manefield M; Lee M; Koenig J, 2017, 'The nature and relevance of solvent stress in microbes and mechanisms of tolerance.', in Chénard C; Lauro FM(ed.), Microbial Ecology in Extreme Environments., Springer, pp. 201 - 213, http://dx.doi.org/10.1007/978-3-319-51686-8_9
Journal articles | 2023
Kronen M; Vázquez-Campos X; Wilkins MR; Lee M; Manefield MJ, 2023, 'Evidence for a Putative Isoprene Reductase in Acetobacterium wieringae', mSystems, 8, http://dx.doi.org/10.1128/msystems.00119-23
Journal articles | 2023
Lee M; Manefield M, 2023, 'Microbiology in sustainable remediation of contaminated sites', Microbiology Australia, 44, pp. 49 - 51, http://dx.doi.org/10.1071/MA23012
Journal articles | 2023
Song YC; Holland SI; Lee M; Chen G; Löffler FE; Manefield MJ; Hugenholtz P; Kappler U, 2023, 'A comparative genome analysis of the Bacillota (Firmicutes) class Dehalobacteriia', Microbial Genomics, 9, http://dx.doi.org/10.1099/mgen.0.001039
Journal articles | 2022
Holland SI; Vázquez-Campos X; Ertan H; Edwards RJ; Manefield MJ; Lee M, 2022, 'Metaproteomics reveals methyltransferases implicated in dichloromethane and glycine betaine fermentation by ‘Candidatus Formimonas warabiya’ strain DCMF', Frontiers in Microbiology, 13, pp. 1035247, http://dx.doi.org/10.3389/fmicb.2022.1035247
Journal articles | 2022
Lee M; Liang G; Holland SI; O'Farrell C; Osborne K; Manefield MJ, 2022, 'Dehalobium species implicated in 2,3,7,8-tetrachlorodibenzo-p-dioxin dechlorination in the contaminated sediments of Sydney Harbour Estuary', Marine Pollution Bulletin, 179, pp. 113690, http://dx.doi.org/10.1016/j.marpolbul.2022.113690
Journal articles | 2022
Méndez V; Holland S; Bhardwaj S; McDonald J; Khan S; O'Carroll D; Pickford R; Richards S; O'Farrell C; Coleman N; Lee M; Manefield MJ, 2022, 'Aerobic biotransformation of 6:2 fluorotelomer sulfonate by Dietzia aurantiaca J3 under sulfur-limiting conditions', Science of the Total Environment, 829, http://dx.doi.org/10.1016/j.scitotenv.2022.154587
Journal articles | 2022
Sun J; Jennepalli S; Lee M; Jones A; O'Carroll DM; Manefield MJ; Bhadbhade M; Åkermark B; Das B; Kumar N, 2022, 'Efficient Reductive Defluorination of Branched PFOS by Metal-Porphyrin Complexes', Environmental Science and Technology, 56, pp. 7830 - 7839, http://dx.doi.org/10.1021/acs.est.1c08254
Journal articles | 2021
Holland SI; Ertan H; Montgomery K; Manefield MJ; Lee M, 2021, 'Novel dichloromethane-fermenting bacteria in the Peptococcaceae family', ISME Journal, 15, pp. 1709 - 1721, http://dx.doi.org/10.1038/s41396-020-00881-y
Journal articles | 2021
Sun J; Jennepalli S; Lee M; O'Carroll DM; Åkermark B; Manefield MJ; Das B; Kumar N, 2021, 'Removal of per- And polyfluoroalkyl substances (PFAS) from water by ceric(iv) ammonium nitrate', RSC Advances, 11, pp. 17642 - 17645, http://dx.doi.org/10.1039/d1ra02635f
Journal articles | 2020
O'Carroll DM; Jeffries TC; Lee MJ; Le ST; Yeung A; Wallace S; Battye N; Patch DJ; Manefield MJ; Weber KP, 2020, 'Developing a roadmap to determine per- and polyfluoroalkyl substances-microbial population interactions', Science of the Total Environment, 712, pp. 135994, http://dx.doi.org/10.1016/j.scitotenv.2019.135994
Journal articles | 2019
Beckmann S; Luk AWS; Gutierrez-Zamora ML; Chong NHH; Thomas T; Lee M; Manefield M, 2019, 'Long-term succession in a coal seam microbiome during in situ biostimulation of coalbed-methane generation', ISME Journal, 13, pp. 632 - 650, http://dx.doi.org/10.1038/s41396-018-0296-5
Journal articles | 2019
Heckel B; Phillips E; Edwards E; Sherwood Lollar B; Elsner M; Manefield MJ; Lee M, 2019, 'Reductive Dehalogenation of Trichloromethane by Two Different Dehalobacter restrictus Strains Reveal Opposing Dual Element Isotope Effects', Environmental Science and Technology, 53, pp. 2332 - 2343, http://dx.doi.org/10.1021/acs.est.8b03717
Journal articles | 2019
Holland SI; Edwards RJ; Ertan H; Wong YK; Russell TL; Deshpande NP; Manefield MJ; Lee M, 2019, 'Whole genome sequencing of a novel, dichloromethane-fermenting Peptococcaceae from an enrichment culture', PeerJ, 2019, http://dx.doi.org/10.7717/peerj.7775
Journal articles | 2019
Kronen M; Lee M; Jones ZL; Manefield MJ, 2019, 'Reductive metabolism of the important atmospheric gas isoprene by homoacetogens', ISME Journal, 13, pp. 1168 - 1182, http://dx.doi.org/10.1038/s41396-018-0338-z
Journal articles | 2019
Low A; Zhao S; Rogers MJ; Zemb O; Lee M; He J; Manefield M, 2019, 'Isolation, characterization and bioaugmentation of an acidotolerant 1,2-dichloroethane respiring Desulfitobacterium species from a low pH aquifer', FEMS Microbiology Ecology, 95, http://dx.doi.org/10.1093/femsec/fiz055
Journal articles | 2019
Webster J; Lee M; Gurba LW; Manefield M; Thomas T, 2019, 'The effect of oxidative treatment on soluble compounds from Australian coal', Fuel, 257, pp. 116071 - 116071, http://dx.doi.org/10.1016/j.fuel.2019.116071
Journal articles | 2018
Chau ATT; Lee M; Adrian L; Manefield MJ, 2018, 'Syntrophic partners enhance growth and respiratory dehalogenation of hexachlorobenzene by Dehalococcoides mccartyi strain CBDB1', Frontiers in Microbiology, 9, http://dx.doi.org/10.3389/fmicb.2018.01927
Journal articles | 2018
Jugder BE; Payne KAP; Fisher K; Bohl S; Lebhar H; Manefield M; Lee MJ; Leys D; Marquis C, 2018, 'Heterologous Production and Purification of a Functional Chloroform Reductive Dehalogenase', ACS Chemical Biology, http://dx.doi.org/10.1021/acschembio.7b00846
Journal articles | 2017
Alfán-Guzmán R; Ertan H; Manefield M; Lee M, 2017, 'Genome sequence of Dehalobacter sp. strain TeCB1, able to respire chlorinated benzenes', Genome Announcements, 5, http://dx.doi.org/10.1128/genomeA.01681-16
Journal articles | 2017
Alfán-Guzmán R; Ertan H; Manefield M; Lee M, 2017, 'Isolation and characterization of Dehalobacter sp. strain TeCB1 including identification of TcbA: A novel tetra- and trichlorobenzene reductive Dehalogenase', Frontiers in Microbiology, 8, http://dx.doi.org/10.3389/fmicb.2017.00558
Journal articles | 2017
Jugder BE; Bohl S; Lebhar H; Healey RD; Manefield M; Marquis CP; Lee M, 2017, 'A bacterial chloroform reductive dehalogenase: purification and biochemical characterization', Microbial Biotechnology, 10, pp. 1640 - 1648, http://dx.doi.org/10.1111/1751-7915.12745
Journal articles | 2017
Munro JE; Kimyon Ö; Rich DJ; Koenig J; Tang S; Low A; Lee M; Manefield M; Coleman NV, 2017, 'Co-occurrence of genes for aerobic and anaerobic biodegradation of dichloroethane in organochlorine-contaminated groundwater', FEMS Microbiology Ecology, 93, http://dx.doi.org/10.1093/femsec/fix133
Journal articles | 2016
Beckmann S; Welte C; Li X; Oo YM; Kroeninger L; Heo Y; Zhang M; Ribeiro D; Lee M; Bhadbhade M; Marjo CE; Seidel J; Deppenmeier U; Manefield M, 2016, 'Novel phenazine crystals enable direct electron transfer to methanogens in anaerobic digestion by redox potential modulation', Energy and Environmental Science, 9, pp. 644 - 655, http://dx.doi.org/10.1039/c5ee03085d
Journal articles | 2016
Jugder BE; Ertan H; Bohl S; Lee M; Marquis CP; Manefield M, 2016, 'Organohalide respiring bacteria and reductive dehalogenases: Key tools in organohalide bioremediation', Frontiers in Microbiology, 7, http://dx.doi.org/10.3389/fmicb.2016.00249
Journal articles | 2016
Jugder BE; Ertan H; Wong YK; Braidy N; Manefield M; Marquis CP; Lee M, 2016, 'Genomic, transcriptomic and proteomic analyses of dehalobacter UNSWDHB in response to chloroform', Environmental Microbiology Reports, 8, pp. 814 - 824, http://dx.doi.org/10.1111/1758-2229.12444
Journal articles | 2016
Kimyon O; Uluturk ZI; Nizalapur S; Lee M; Kutty SK; Beckmann S; Kumar N; Manefield M, 2016, 'N-Acetylglucosamine Inhibits LuxR, LasR and CviR Based Quorum Sensing Regulated Gene Expression Levels', FRONTIERS IN MICROBIOLOGY, 7, http://dx.doi.org/10.3389/fmicb.2016.01313
Journal articles | 2016
Koenig JC; Boparai HK; Lee MJ; O'Carroll DM; Barnes RJ; Manefield MJ, 2016, 'Particles and enzymes: Combining nanoscale zero valent iron and organochlorine respiring bacteria for the detoxification of chloroethane mixtures', Journal of Hazardous Materials, 308, pp. 106 - 112, http://dx.doi.org/10.1016/j.jhazmat.2015.12.036
Journal articles | 2016
Patterson BM; Lee M; Bastow TP; Wilson JT; Donn MJ; Furness A; Goodwin B; Manefield M, 2016, 'Concentration effects on biotic and abiotic processes in the removal of 1,1,2-trichloroethane and vinyl chloride using carbon-amended ZVI', Journal of Contaminant Hydrology, 188, pp. 1 - 11, http://dx.doi.org/10.1016/j.jconhyd.2016.02.004
Journal articles | 2016
Wong YK; Holland SI; Ertan H; Manefield M; Lee M, 2016, 'Isolation and characterization of Dehalobacter sp. strain UNSWDHB capable of chloroform and chlorinated ethane respiration', Environmental microbiology, 18, pp. 3092 - 3105, http://dx.doi.org/10.1111/1462-2920.13287
Journal articles | 2015
Gutierrez-Zamora ML; Lee M; Manefield M; Thomas T, 2015, 'Biotransformation of coal linked to nitrification', International Journal of Coal Geology, 137, pp. 136 - 141, http://dx.doi.org/10.1016/j.coal.2014.12.001
Journal articles | 2015
Jugder BE; Ertan H; Lee M; Manefield M; Marquis CP, 2015, 'Reductive Dehalogenases Come of Age in Biological Destruction of Organohalides', Trends in Biotechnology, 33, pp. 595 - 610, http://dx.doi.org/10.1016/j.tibtech.2015.07.004
Journal articles | 2015
Koenig J; Lee M; Manefield M, 2015, 'Aliphatic organochlorine degradation in subsurface environments', Reviews in Environmental Science and Biotechnology, 14, pp. 49 - 71, http://dx.doi.org/10.1007/s11157-014-9345-3
Journal articles | 2015
Lee M; Marquis C; Judger B-E; Manefield M, 2015, 'Anaerobic microorganisms and bioremediation of organohalide pollution', MICROBIOLOGY AUSTRALIA, 36, pp. 125 - 128, http://dx.doi.org/10.1071/MA15044
Journal articles | 2015
Lee M; Wells E; Wong YK; Koenig J; Adrian L; Richnow HH; Manefield M, 2015, 'Relative contributions of dehalobacter and zerovalent iron in the degradation of chlorinated methanes', Environmental Science and Technology, 49, pp. 4481 - 4489, http://dx.doi.org/10.1021/es5052364
Journal articles | 2013
Deshpande NP; Wong YK; Manefield M; Wilkins MR; Lee M, 2013, 'Genome Sequence of Dehalobacter UNSWDHB, a Chloroform-Dechlorinating Bacterium', GENOME ANNOUNCEMENTS, 1, http://dx.doi.org/10.1128/genomeA.00720-13
Journal articles | 2013
Deshpande NP; Wong YK; Manefield M; Wilkins MR; Lee M, 2013, 'Genome sequence of Dehalobacter UNSWDHB, a chloroform-dechlorinating bacterium', Genome Announcements, 1, http://dx.doi.org/10.1128/genomeA.e00720-13
Journal articles | 2012
Koenig JC; Lee M; Manefield MJ, 2012, 'Successful microcosm demonstration of a strategy for biodegradation of a mixture of carbon tetrachloride and perchloroethene harnessing sulfate reducing and dehalorespiring bacteria', Journal of Hazardous Materials, 219-220, pp. 169 - 175, http://dx.doi.org/10.1016/j.jhazmat.2012.03.076
Journal articles | 2012
Lee M; Low AB; Zemb ON; Koenig J; Michaelsen A; Manefield MJ, 2012, 'Complete chloroform dechlorination by organochlorine respiration and fermentation', Environmental Microbiology, 14, pp. 883 - 894, http://dx.doi.org/10.1111/j.1462-2920.2011.02656.x
Journal articles | 2012
Zemb ON; Lee M; Gutierrez-Zamora M; Hamelin J; Coupland KG; Hazrin-Chong N; Taleb I; Manefield MJ, 2012, 'Improvement of RNA-SIP by pyrosequencing to identify putative 4-n-nonylphenol degraders in activated sludge', Water Research, 46, pp. 601 - 610, http://dx.doi.org/10.1016/j.watres.2011.10.047
Journal articles | 2011
Lee M; Atkins C; Pate J, 2011, 'Synthesis, transport and accumulation of quinolizidine alkaloids in Lupinus albus L. and L. angustifolius', Journal of Experimental Botany, 58, pp. 935 - 946, http://dx.doi.org/10.1093/jxb/erl254
Journal articles | 2011
Penesyan A; Tebben J; Lee M; Thomas T; Kjelleberg S; Harder T; Egan S, 2011, 'Identification of the antibacterial compound produced by the marine epiphytic bacterium Pseudovibrio sp. D323 and related sponge-associated bacteria.', Marine Drugs, 9, pp. 1391 - 1402, http://dx.doi.org/10.3390/md9081391
Journal articles | 2010
Lee M; Cord-Ruwisch R; Manefield MJ, 2010, 'A process for the purification of organochlorine contaminated activated carbon: Sequential solvent purging and reductive dechlorination', Water Research, 44, pp. 1580 - 1590, http://dx.doi.org/10.1016/j.watres.2009.11.004
Journal articles | 2010
Yee LH; Aagaard V; Johnstone A; Lee M; Kjelleberg S; Manefield MJ, 2010, 'Development of a treatment solution for reductive dechlorination of hexachloro-1,3-butadiene in vadose zone soil', Biodegradation, 21, pp. 947 - 956, http://dx.doi.org/10.1007/s10532-010-9354-z
Journal articles | 2010
Zemb ON; Lee M; Low AB; Manefield MJ, 2010, 'Reactive iron barriers: a niche enabling microbial dehalorespiration of 1,2-dichloroethane', Applied Microbiology and Biotechnology, 88, pp. 319 - 325, http://dx.doi.org/10.1007/s00253-010-2740-y
Journal articles | 2009
Watanabe K; Manefield MJ; Lee M; Kouzuma A, 2009, 'Electron shuttles in biotechnology', Current Opinion in Biotechnology, 20, pp. 633 - 641, http://dx.doi.org/10.1016/j.copbio.2009.09.006
Journal articles | 2008
James DL; Cord-Ruwisch R; Schleheck DF; Lee M; Manefield MJ, 2008, 'Cyanocobalamin enables activated sludge bacteria to dechlorinate hexachloro-1,3-butadiene to non-chlorinated gases', Bioremediation Journal, 12, pp. 177 - 184, http://dx.doi.org/10.1080/10889860802477085
Journal articles | 2007
Low A; Schleheck DF; Aagaard V; Khou M; Manefield MJ; Lee M, 2007, 'Options for in situ remediation of soil contaminated with a mixture of perchlorinated compounds', Bioremediation Journal, 11, pp. 113 - 124, http://dx.doi.org/10.1080/10889860701548556
Preprints | 2022
Kronen M; Vázquez-Campos X; Wilkins M; Lee M; Manefield M, 2022, Evidence for a putative isoprene reductase inAcetobacterium wieringae, , http://dx.doi.org/10.1101/2022.11.16.516518
Preprints | 2021
Lee M; Liang G; Holland S; O’Farrell C; Osbourne K; Manefield M, 2021, Dehalobium species implicated in 2,3,7,8-tetrachloro-p-dioxin dechlorination in the contaminated sediments of Sydney Harbour Estuary, , http://dx.doi.org/10.1101/2021.12.12.472303
Preprints | 2020
Holland SI; Ertan H; Manefield MJ; Lee M, 2020, A novel, dichloromethane-fermenting bacterium in the Peptococcaceae family, ‘Candidatus Formamonas warabiya’, gen. nov. sp. nov., , http://dx.doi.org/10.1101/2020.08.09.233494
Jugder BE; Payne KAP; Fisher K; Manefield M; Lee M; Les D; Marquis CM, 2017, 'Heterologous production of functional chloroform reductive dehalogenase', in The FASEB Journal, Federation of American Society of Experimental Biology (FASEB), Chicago, US, Vol. 31, pp. 548 - 552, presented at American Society for Biochemistry and Molecular Biology Annual Meeting, Chicago, US, http://dx.doi.org/10.1021/acschembio.7b00846