Dr Michael Payne

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michael.payne@unsw.edu.au

Journal articles | 2023

Luo L; Payne M; Wang Q; Kaur S; Rathnayake IU; Graham R; Gall M; Draper J; Martinez E; Octavia S; Tanaka MM; Jennison AV; Sintchenko V; Lan R, 2023, 'Genomic Epidemiology and Multilevel Genome Typing of Australian Salmonella enterica Serovar Enteritidis', Microbiology Spectrum, vol. 11, http://dx.doi.org/10.1128/spectrum.03014-22

Journal articles | 2022

Kaur S; Payne M; Luo L; Octavia S; Tanaka MM; Sintchenko V; Lan R, 2022, 'MGTdb: A web service and database for studying the global and local genomic epidemiology of bacterial pathogens', Database, vol. 2022, http://dx.doi.org/10.1093/database/baac094

Journal articles | 2022

Luo Y; Ye J; Payne M; Hu D; Jiang J; Lan R, 2022, 'Genomic Epidemiology of Vibrio cholerae O139, Zhejiang Province, China, 1994–2018', Emerging Infectious Diseases, vol. 28, pp. 2253 - 2260, http://dx.doi.org/10.3201/eid2811.212066

Journal articles | 2022

Zhang X; Payne M; Kaur S; Lan R, 2022, 'Improved Genomic Identification, Clustering, and Serotyping of Shiga Toxin-Producing Escherichia coli Using Cluster/Serotype-Specific Gene Markers', Frontiers in Cellular and Infection Microbiology, vol. 11, http://dx.doi.org/10.3389/fcimb.2021.772574

Journal articles | 2021

Cheney L; Payne M; Kaur S; Lan R, 2021, 'Multilevel genome typing describes short- And long-term vibrio cholerae molecular epidemiology', mSystems, vol. 6, pp. e0013421, http://dx.doi.org/10.1128/mSystems.00134-21

Journal articles | 2021

Luo L; Payne M; Kaur S; Hu D; Cheney L; Octavia S; Wang Q; Tanaka MM; Sintchenko V; Lan R, 2021, 'Elucidation of global and national genomic epidemiology of salmonella enterica serovar enteritidis through multilevel genome typing', Microbial Genomics, vol. 7, http://dx.doi.org/10.1099/MGEN.0.000605

Journal articles | 2021

Luo L; Wang H; Payne M; Liang C; Bai L; Zheng H; Zhang Z; Zhang L; Zhang X; yan G; Zou N; Chen X; Wan Z; Xiong Y; Lan R; Li Q, 2021, 'Comparative genomics of Chinese and international isolates of Escherichia albertii: population structure and evolution of virulence and antimicrobial resistance', Microbial Genomics, vol. 7, http://dx.doi.org/10.1099/mgen.0.000710

Journal articles | 2021

Luo L; Wang H; Payne MJ; Liang C; Bai L; Zheng H; Zhang Z; Zhang L; Zhang X; Yan G; Zou N; Chen X; Wan Z; Xiong Y; Lan R; Li Q, 2021, 'Comparative genomics of Chinese and international isolates of Escherichia albertii: population structure and evolution of virulence and antimicrobial resistance', Microbial Genomics, vol. 7, http://dx.doi.org/10.1099/MGEN.0.000710

Journal articles | 2021

Luo Y; Wang H; Liang J; Qian H; Ye J; Chen L; Yang X; Chen Z; Wang F; Octavia S; Payne M; Song X; Jiang J; Jin D; Lan R, 2021, 'Population Structure and Multidrug Resistance of Non-O1/Non-O139 Vibrio cholerae in Freshwater Rivers in Zhejiang, China', Microbial Ecology, vol. 82, pp. 319 - 333, http://dx.doi.org/10.1007/s00248-020-01645-z

Journal articles | 2021

Luu LDW; Payne M; Zhang X; Luo L; Lan R, 2021, 'Development and comparison of novel multiple cross displacement amplification (MCDA) assays with other nucleic acid amplification methods for SARS-CoV-2 detection', Scientific Reports, vol. 11, pp. 1873, http://dx.doi.org/10.1038/s41598-021-81518-8

Journal articles | 2021

Payne M; Octavia S; Luu LDW; Sotomayor-Castillo C; Wang Q; Tay ACY; Sintchenko V; Tanaka MM; Lan R, 2021, 'Enhancing genomics-based outbreak detection of endemic salmonella enterica serovar typhimurium using dynamic thresholds', Microbial Genomics, vol. 7, http://dx.doi.org/10.1099/MGEN.0.000310

Journal articles | 2021

Zhang X; Payne M; Nguyen T; Kaur S; Lan R, 2021, 'Cluster-specific gene markers enhance Shigella and Enteroinvasive Escherichia coli in silico serotyping', Microbial Genomics, vol. 7, http://dx.doi.org/10.1099/mgen.0.000704

Journal articles | 2021

Zhang X; Payne M; Nguyen T; Kaur S; Lan R, 2021, 'Cluster-specific gene markers enhance Shigella and enteroinvasive Escherichia coli in silico serotyping', Microbial Genomics, vol. 7, http://dx.doi.org/10.1099/MGEN.0.000704

Journal articles | 2020

Payne M; Kaur S; Wang Q; Hennessy D; Luo L; Octavia S; Tanaka MM; Sintchenko V; Lan R, 2020, 'Multilevel genome typing: Genomics-guided scalable resolution typing of microbial pathogens', Eurosurveillance, vol. 25, http://dx.doi.org/10.2807/1560-7917.ES.2020.25.20.1900519

Journal articles | 2020

Wai Luu LD; Payne M; Zhang X; Luo L; Lan R, 2020, 'Development and comparison of a novel multiple cross displacement amplification (MCDA) assay with other nucleic acid amplification methods for SARS-CoV-2 detection', , http://dx.doi.org/10.1101/2020.10.03.20206193

Journal articles | 2020

Zhang X; Payne M; Wang Q; Sintchenko V; Lan R, 2020, 'Highly Sensitive and Specific Detection and Serotyping of Five Prevalent Salmonella Serovars by Multiple Cross-Displacement Amplification', Journal of Molecular Diagnostics, vol. 22, pp. 708 - 719, http://dx.doi.org/10.1016/j.jmoldx.2020.02.006

Journal articles | 2019

Luo L; Chen X; Payne M; Cao X; Wang Y; Zhang J; Deng J; Wang H; Zhang Z; Li Q; Lan R; Ye C, 2019, 'Case report: Whole genome sequencing based investigation of maternal-neonatal listeriosis in Sichuan, China', BMC Infectious Diseases, vol. 19, pp. 893, http://dx.doi.org/10.1186/s12879-019-4551-9

Journal articles | 2019

Payne M; Weerasinghe H; Tedja I; Andrianopoulos A, 2019, 'A unique aspartyl protease gene expansion in Talaromyces marneffei plays a role in growth inside host phagocytes', Virulence, vol. 10, pp. 277 - 291, http://dx.doi.org/10.1080/21505594.2019.1593776

Journal articles | 2019

Xu Z; Octavia S; Luu LDW; Payne M; Timms V; Tay CY; Keil AD; Sintchenko V; Guiso N; Lan R, 2019, 'Pertactin-negative and filamentous hemagglutinin-negative Bordetella pertussis, Australia, 2013-2017', Emerging Infectious Diseases, vol. 25, pp. 1196 - 1199, http://dx.doi.org/10.3201/eid2506.180240

Journal articles | 2019

Xu Z; Wang Z; Luan Y; Li Y; Liu X; Peng X; Octavia S; Payne M; Lan R, 2019, 'Genomic epidemiology of erythromycin-resistant Bordetella pertussis in China', Emerging Microbes and Infections, vol. 8, pp. 461 - 470, http://dx.doi.org/10.1080/22221751.2019.1587315

Journal articles | 2019

Zhang X; Payne M; Lan R, 2019, 'In silico identification of serovar-specific genes for salmonella serotyping', Frontiers in Microbiology, vol. 10, pp. 835, http://dx.doi.org/10.3389/fmicb.2019.00835

Journal articles | 2016

Weerasinghe H; Payne M; Beard S; Andrianopoulos A, 2016, 'Organism-wide studies into pathogenicity and morphogenesis in Talaromyces marneffei', FUTURE MICROBIOLOGY, vol. 11, pp. 511 - 526, http://dx.doi.org/10.2217/fmb.16.9

Journal articles | 2013

Pasricha S; Payne M; Canovas D; Pase L; Ngaosuwankul N; Beard S; Oshlack A; Smyth GK; Chaiyaroj SC; Boyce KJ; Andrianopoulos A, 2013, 'Cell-Type-Specific Transcriptional Profiles of the Dimorphic Pathogen Penicillium marneffei Reflect Distinct Reproductive, Morphological, and Environmental Demands', G3-GENES GENOMES GENETICS, vol. 3, pp. 1997 - 2014, http://dx.doi.org/10.1534/g3.113.006809

Journal articles | 2012

Bugeja HE; Boyce KJ; Weerasinghe H; Beard S; Jeziorowski A; Pasricha S; Payne M; Schreider L; Andrianopoulos A, 2012, 'Tools for high efficiency genetic manipulation of the human pathogen Penicillium marneffei', FUNGAL GENETICS AND BIOLOGY, vol. 49, pp. 772 - 778, http://dx.doi.org/10.1016/j.fgb.2012.08.003
Preprints | 2023

Cheney L; Payne M; Kaur S; Lan R, 2023, SaLTy: a novelStaphylococcus aureusLineage Typer, http://dx.doi.org/10.1101/2023.02.03.527095

Preprints | 2022

Kaur S; Payne M; Luo L; Octavia S; Tanaka M; Sintchenko V; Lan R, 2022, MGTdb: A web service and database for studying the global and local genomic epidemiology of bacterial pathogens, http://dx.doi.org/10.1101/2022.06.14.496187

Preprints | 2022

Luo L; Payne M; Wang Q; Kaur S; Rathnayake I; Graham R; Gall M; Draper J; Martinez E; Octavia S; Tanaka M; Jennison A; Sintchenko V; Lan R, 2022, Genomic epidemiology and multilevel genome typing of Australian Salmonella enterica serovar Enteritidis, http://dx.doi.org/10.1101/2022.05.18.492204

Preprints | 2020

Luo L; Payne M; Kaur S; Hu D; Cheney L; Octavia S; Wang Q; Tanaka M; Sintchenko V; Lan R, 2020, Elucidation of global and local genomic epidemiology of Salmonella enterica serovar Enteritidis through multilevel genome typing, http://dx.doi.org/10.1101/2020.06.30.169953

Conference Papers | 2018

Andrianopoulos A; Weerasinghe H; Payne M, 2018, 'Morphological and metabolic adaptation to environmental conditions by Talaromyces marneffei and its role in the host.', in MEDICAL MYCOLOGY, OXFORD UNIV PRESS, pp. S63 - S63, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000434852700347&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

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