2020 PhD in Microbiology - São Paulo State University – BRAZIL
Thesis: Diversity and distribution of cyanobacteria in biological soil crusts from Caatinga biome based on polyphasic taxonomy and metagenomic analysis.
2020 Practicum Student University of New South Wales - AUSTRALIA
2016 Master’s in microbiology - São Paulo State University - BRAZIL
Thesis: Diversity of cyanobacteria in biological crusts and evaluation of cellulolytic and hemicellulolytic profile
2016 Research Internship Arizona State University - USA
2014 Bachelor in Biological Sciences - São Paulo State University – BRAZIL
Science
School of Biotech & Biomolecular Science
Nathali Machado de Lima is an accomplished investigator with over ten years of experience in environmental microbiology. She has worked in three different countries, including Brazil, the USA, and Australia, and her research focuses on identifying and selecting microbes, exploring their resilience to extreme conditions, and their applications as sustainable alternatives in environmental conservation and restoration initiatives, as well as in industry and agriculture sectors. In addition, Nathali explores the potential of microorganisms as plant bioinoculants to improve soil fertility and structure, boost plant germination and growth rates in dryland systems and degraded areas, and ultimately restore degraded environments. Her research findings have been published in several papers, some of which were the first available publications on the composition, abundance, and environmental variables driving cyanobacterial biocrust communities in Brazil's important biomes. Since completing her PhD in 2020, Nathali has been continuously employed at UNSW, working on several projects.
Benaud N; de Lima NM; Wong SY; Vázquez-Campos X; Majumdar PR; Wilkins D; Montgomery K; Wiechers M; Summerell BA; Ferrari BC, 2026, 'Integrating novel culturing and culture‐independent methods to unveil soil fungal dark matter, functional guilds and environmental drivers across Robinson Ridge, East Antarctica', Mycology, 17, pp. 635 - 658, http://dx.doi.org/10.1080/21501203.2025.2579297
Journal articles | 2026
Liu J; Abdullah K; Crane S; Wilkins D; Hince G; Spedding T; de Lima NM; Ferrari B, 2026, 'Nutrient washing to amend nitrite accumulation during hydrocarbon remediation of Antarctic soil', Polar Biology, 49, http://dx.doi.org/10.1007/s00300-026-03480-3
Journal articles | 2026
Stewart J; Machado de Lima N, 2026, 'Australian drylands as a case-study of the impacts of climate, groundcover, and vertebrate activity on soil biodiversity', Microbiology Australia, 47, pp. 20 - 25, http://dx.doi.org/10.1071/ma26103
Journal articles | 2026
Tan KKY; Vázquez-Campos X; Price GAV; Williams KL; McWatters RS; Abdullah K; Machado de Lima N; Laird T; Ray AE; Vink JA; Tribbia DZ; Wilkins D; Spedding T; Ferrari BC, 2026, 'Persistent petroleum pollution shifts soil microbial responses in Bunger Hills, East Antarctica', Communications Earth and Environment, 7, http://dx.doi.org/10.1038/s43247-026-03299-0
Journal articles | 2025
Lopes IG; de Lima NM; Ribeiro T; Murta D; Yong JWH; Lalander C, 2025, 'Olive Pomace Inclusion Alters the Microbial Community of Black Soldier Fly Larvae Frass While Maintaining Fertilizer Quality', Microbiologyopen, 14, http://dx.doi.org/10.1002/mbo3.70180
Journal articles | 2025
Stewart J; Francis RJ; Eldridge DJ; Kingsford RT; de Lima NM, 2025, 'Advancing remote sensing of biocrusts with drone imagery and machine learning', Geoderma, 458, http://dx.doi.org/10.1016/j.geoderma.2025.117315
Journal articles | 2025
Stewart J; de Lima NM; Eldridge DJ; West R; Kingsford RT, 2025, 'Restoring aboveground trophic diversity contributes to belowground microbial diversity in drylands', Biological Conservation, 305, http://dx.doi.org/10.1016/j.biocon.2025.111056
Journal articles | 2025
Wong SY; Machado-de-Lima NM; Wilkins D; Zhang E; Ferrari BC, 2025, 'Fine-scale landscape heterogeneity drives microbial community structure at Robinson Ridge, East Antarctica', Science of the Total Environment, 958, http://dx.doi.org/10.1016/j.scitotenv.2024.177964
Journal articles | 2024
Alameda-Martín A; Chamizo S; Maggioli L; Roman R; Machado-de-Lima N; Muñoz-Rojas M; Cantón Y, 2024, 'Optimizing survival and growth of inoculated biocrust-forming cyanobacteria through native plant-based habitat amelioration', Journal of Environmental Management, 370, http://dx.doi.org/10.1016/j.jenvman.2024.122960
Journal articles | 2024
Dadzie FA; Moles AT; Erickson TE; Machado de Lima N; Muñoz-Rojas M, 2024, 'Inoculating native microorganisms improved soil function and altered the microbial composition of a degraded soil', Restoration Ecology, 32, http://dx.doi.org/10.1111/rec.14025
Journal articles | 2024
Stewart J; de Lima NM; Kingsford R; Muñoz-Rojas M, 2024, 'Soil Bacterial Biodiversity in Drylands Is Dependent on Groundcover Under Increased Temperature', Journal of Sustainable Agriculture and Environment, 3, http://dx.doi.org/10.1002/sae2.70027
Journal articles | 2023
Machado-de-Lima NM; Charlesworth J; Stewart J; Ooi MKJ; Muñoz-Rojas M, 2023, 'Seed biopriming at different concentrations to assess the effects of Cyanobacteria on germination and seedling performance of keystone arid species', Journal of Sustainable Agriculture and Environment, 2, pp. 266 - 275, http://dx.doi.org/10.1002/sae2.12049
Journal articles | 2022
Jiménez-González MA; Machado de Lima N; Chilton AM; Almendros G; Muñoz-Rojas M, 2022, 'Biocrust cyanobacteria inoculants biomineralize gypsum and preserve indigenous bacterial communities in dryland topsoil', Geoderma, 406, http://dx.doi.org/10.1016/j.geoderma.2021.115527
Journal articles | 2022
Schultz NL; Sluiter IRK; Allen GG; Machado-de-Lima NM; Muñoz-Rojas M, 2022, 'Biocrust Amendments to Topsoils Facilitate Biocrust Restoration in a Post-mining Arid Environment', Frontiers in Microbiology, 13, http://dx.doi.org/10.3389/fmicb.2022.882673
Journal articles | 2021
Machado de Lima N; Thomsen A; Ooi M; Muñoz-Rojas M, 2021, 'Bushfire impacts on a threatened swamp ecosystem: responses of the soil microbial communities and restoration', , http://dx.doi.org/10.5194/egusphere-egu21-3778
Journal articles | 2021
Machado de Lima NM; Muñoz-Rojas M; Vázquez-Campos X; Branco LHZ, 2021, 'Biocrust cyanobacterial composition, diversity, and environmental drivers in two contrasting climatic regions in Brazil', Geoderma, 386, http://dx.doi.org/10.1016/j.geoderma.2020.114914
Journal articles | 2021
Muñoz-Rojas M; Machado de Lima NM; Chamizo S; Bowker MA, 2021, 'Restoring post-fire ecosystems with biocrusts: Living, photosynthetic soil surfaces', Current Opinion in Environmental Science and Health, 23, http://dx.doi.org/10.1016/j.coesh.2021.100273
Journal articles | 2021
Stewart J; Machado de Lima N; Kingsford R; Muñoz-Rojas M, 2021, 'Soil microbial responses to passive restoration strategies in drylands: a temporal comparison of soil biodiversity and ecosystem function', , http://dx.doi.org/10.5194/egusphere-egu21-16398
Journal articles | 2020
Lim NMMHD; Branco LHZ, 2020, 'Biological soil crusts: New genera and species of Cyanobacteria from Brazilian semi-Arid regions', Phytotaxa, 470, pp. 263 - 281, http://dx.doi.org/10.11646/phytotaxa.470.4.1
Journal articles | 2020
de Lima NMM; Branco LHZ, 2020, 'Biological soil crusts: new genera and species of Cyanobacteria from Brazilian semi-arid regions (vol 470, pg 263, 2020)', PHYTOTAXA, 472, pp. 299 - 300, http://dx.doi.org/10.11646/phytotaxa.472.3.10
Journal articles | 2019
Machado-de-Lima NM; Fernandes VMC; Roush D; Velasco Ayuso S; Rigonato J; Garcia-Pichel F; Branco LHZ, 2019, 'The Compositionally Distinct Cyanobacterial Biocrusts From Brazilian Savanna and Their Environmental Drivers of Community Diversity', Frontiers in Microbiology, 10, http://dx.doi.org/10.3389/fmicb.2019.02798
Journal articles | 2019
Martins MD; Machado-de-Lima NM; Branco LHZ, 2019, 'Polyphasic approach using multilocus analyses supports the establishment of the new aerophytic cyanobacterial genus Pycnacronema (Coleofasciculaceae, Oscillatoriales)', Journal of Phycology, 55, pp. 146 - 159, http://dx.doi.org/10.1111/jpy.12805
Journal articles | 2018
Fernandes VMC; Machado de Lima NM; Roush D; Rudgers J; Collins SL; Garcia-Pichel F, 2018, 'Exposure to predicted precipitation patterns decreases population size and alters community structure of cyanobacteria in biological soil crusts from the Chihuahuan Desert', Environmental Microbiology, 20, pp. 259 - 269, http://dx.doi.org/10.1111/1462-2920.13983
Journal articles | 2017
Machado-de-Lima NM; Martins MD; Branco LHZ, 2017, 'Description of a tropical new species of Wilmottia (Oscillatoriales, Cyanobacteria) and considerations about the monophyly of W. murrayi', Phytotaxa, 307, pp. 43 - 54, http://dx.doi.org/10.11646/phytotaxa.307.1.4
Tribbia D; Lebre P; Vázquez-Campos X; Ray A; Laird T; Machado de Lima N; Maggs-Kölling G; Cowan D; Ferrari B, 2026, Trace gas oxidation supports sub-surface microbial communities across Namib Desert fog and aridity gradients, http://dx.doi.org/10.64898/2026.02.19.706496
Muñoz-Rojas M; Dadzie F; Machado de Lima N, 2025,  Soil microbial based strategies and seed enhancement technologies reconnect plant-soil biodiversity and improve restoration outcomes , http://dx.doi.org/10.5194/egusphere-egu24-16797
Preprints | 2025
Tan K; Vázquez-Campos X; Price G; Williams K; McWatters R; Abdullah K; de Lima NM; Laird T; Ray A; Vink J; Tribbia D; Wilkins D; Spedding T; Ferrari B, 2025, Persistent Petroleum Pollution: Microbial Responses in Bunger Hills, East Antarctica, http://dx.doi.org/10.21203/rs.3.rs-6608817/v1
Other | 2023
Machado de Lima NM; Tangney R; Muñoz Rojas M; Ooi M, 2023, Seed microbial community characterisation and isolation from three species common to fire-prone Australia., http://dx.doi.org/10.5194/egusphere-egu23-10170
Other | 2023
Muñoz-Rojas M; Dadzie F; Machado de Lima N, 2023, Emerging soil microbial-based strategies and seed enhancement technologies for restoring biodiverse degraded ecosystems, http://dx.doi.org/10.5194/egusphere-egu23-14965
Other | 2022
Dadzie F; Machado de Lima N; Muñoz- Rojas M, 2022, Native soil bacteria and biocrust cyanobacteria inoculation improve seedling emergence of native plants on saline dryland soils , http://dx.doi.org/10.5194/egusphere-egu22-9005
Other | 2022
Machado de Lima N; Munoz Rojas M, 2022, Teaching and enriching younger generations perception of soil ecosystems and dryland restoration through soil biocrusts, http://dx.doi.org/10.5194/egusphere-egu22-8943
2026 -2029. Innovative Microbial Seed Enhancement Technologies to Overcome Soil Saline Stress in Mining Restoration. Hermon Slade Foundation.
2025-2028. Assessing the use of seed endophytes to fast-track adaptations to climate change in Banksia woodlands. Australia Flora Foundation.
- Testing cyanobacteria applications for decreasing soil hydrophobicity and improving water infiltration of Banksia woodland soils.
- Carbon Sequestration Inoculum Development for Agriculture using phototrophic microorganisms.
- Seed microbial community characterisation and isolation from three species common to fire-prone Australia. Faculty of Research Grant UNSW.
- Cyanobacteria and halophytic bacteria as biofertilizers under high salinity conditions in post-mine rehabilitation.