Dr Daniel Murray
Visiting Fellow

Dr Daniel Murray

Medicine & Health
The Kirby Institute
  • Journal articles | 2022
    Murray DD; Babiker AG; Baker JV; Barkauskas CE; Brown SM; Chang CC; Davey VJ; Gelijns AC; Ginde AA; Grund B; Higgs E; Hudson F; Kan VL; Lane HC; Murray TA; Paredes R; Parmar MKB; Pett S; Phillips AN; Polizzotto MN; Reilly C; Sandkovsky U; Sharma S; Teitelbaum M; Thompson BT; Young BE; Neaton JD; Lundgren JD, 2022, 'Design and implementation of an international, multi-arm, multi-stage platform master protocol for trials of novel SARS-CoV-2 antiviral agents: Therapeutics for Inpatients with COVID-19 (TICO/ACTIV-3)', Clinical Trials, vol. 19, pp. 52 - 61, http://dx.doi.org/10.1177/17407745211049829
    Journal articles | 2022
    Olund Villumsen S; Benfeitas R; Knudsen AD; Gelpi M; Høgh J; Thomsen MT; Murray D; Ullum H; Neogi U; Nielsen SD, 2022, 'Integrative Lipidomics and Metabolomics for System-Level Understanding of the Metabolic Syndrome in Long-Term Treated HIV-Infected Individuals', Frontiers in Immunology, vol. 12, http://dx.doi.org/10.3389/fimmu.2021.742736
    Journal articles | 2022
    Polizzotto MN; Nordwall J; Babiker AG; Phillips A; Vock DM; Eriobu N; Kwaghe V; Paredes R; Mateu L; Ramachandruni S; Narang R; Jain MK; Lazarte SM; Baker JV; Frosch AEP; Poulakou G; Syrigos KN; Arnoczy GS; McBride NA; Robinson PA; Sarafian F; Bhagani S; Taha HS; Benfield T; Liu STH; Antoniadou A; Jensen JUS; Kalomenidis I; Susilo A; Hariadi P; Jensen MD TO; Morales-Rull JL; Helleberg M; Meegada S; Johansen IS; Canario D; Fernández-Cruz E; Metallidis S; Shah A; Sakurai A; Koulouris NG; Trotman R; Weintrob AC; Podlekareva D; Hadi U; Lloyd KM; Røge BT; Saito S; Sweerus K; Malin JJ; Lübbert C; Muñoz J; Cummings MJ; Losso MH; Turner D; Shaw-Saliba K; Dewar R; Highbarger H; Lallemand P; Rehman T; Gerry N; Arlinda D; Chang CC; Grund B; Holbrook MR; Holley HP; Hudson F; McNay LA; Murray DD; Pett SL; Shaughnessy M; Smolskis MC; Touloumi G; Wright ME; Doyle MK; Popik S; Hall C; Ramanathan R; Cao H; Mondou E; Willis T; Thakuria JV; Yel L; Higgs E; Kan VL; Lundgren JD; Neaton JD; Lane HC, 2022, 'Hyperimmune immunoglobulin for hospitalised patients with COVID-19 (ITAC): a double-blind, placebo-controlled, phase 3, randomised trial', The Lancet, vol. 399, pp. 530 - 540, http://dx.doi.org/10.1016/S0140-6736(22)00101-5
    Journal articles | 2021
    Ekenberg C; Reekie J; Zucco AG; Murray DD; Sharma S; Macpherson CR; Babiker A; Kan V; Lane HC; Neaton JD; Lundgren JD, 2021, 'The association of human leukocyte antigen alleles with clinical disease progression in HIV-positive cohorts with varied treatment strategies', AIDS (London, England), vol. 35, pp. 783 - 789, http://dx.doi.org/10.1097/QAD.0000000000002800
    Journal articles | 2021
    Gabrielaite M; Bennedbæk M; Zucco AG; Ekenberg C; Murray DD; Kan VL; Touloumi G; Vandekerckhove L; Turner D; Neaton J; Clifford Lane H; Safo S; Arenas-Pinto A; Polizzotto MN; Günthard HF; Lundgren JD; Marvig RL, 2021, 'Human Immunotypes Impose Selection on Viral Genotypes Through Viral Epitope Specificity', Journal of Infectious Diseases, vol. 224, pp. 2053 - 2063, http://dx.doi.org/10.1093/infdis/jiab253
    Journal articles | 2021
    Gelpi M; Mikaeloff F; Knudsen AD; Benfeitas R; Krishnan S; Akusjärvi SS; Høgh J; Murray DD; Ullum H; Neogi U; Nielsen SD, 2021, 'The central role of the glutamate metabolism in long-term antiretroviral treated HIV-infected individuals with metabolic syndrome', Aging, vol. 13, pp. 22732 - 22751, http://dx.doi.org/10.18632/aging.203622
    Journal articles | 2021
    Kalil AC; Patterson TF; Mehta AK; Tomashek KM; Wolfe CR; Ghazaryan V; Marconi VC; Ruiz-Palacios GM; Hsieh L; Kline S; Tapson V; Iovine NM; Jain MK; Sweeney DA; El Sahly HM; Branche AR; Pineda JR; Lye DC; Sandkovsky U; Luetkemeyer AF; Cohen SH; Finberg RW; Jackson PEH; Taiwo B; Paules CI; Arguinchona H; Erdmann N; Ahuja N; Frank M; Oh M; Kim E-S; Tan SY; Mularski RA; Nielsen H; Ponce PO; Taylor BS; Larson LA; Rouphael NG; Saklawi Y; Cantos VD; Ko ER; Engemann JJ; Amin AN; Watanabe M; Billings J; Elie M-C; Davey RT; Burgess TH; Ferreira J; Green M; Makowski M; Cardoso A; de Bono S; Bonnett T; Proschan M; Deye GA; Dempsey W; Nayak SU; Dodd LE; Beigel JH, 2021, 'Baricitinib plus Remdesivir for Hospitalized Adults with Covid-19', NEW ENGLAND JOURNAL OF MEDICINE, vol. 384, pp. 795 - 807, http://dx.doi.org/10.1056/NEJMoa2031994
    Journal articles | 2021
    Lundgren JD; Grund B; Barkauskas CE; Holland TL; Gottlieb RL; Sandkovsky U; Brown SM; Knowlton KU; Self WH; Files DC; Jain MK; Benfield T; Bowdish ME; Leshnower BG; Baker JV; Jensen JU; Gardner EM; Ginde AA; Harris ES; Johansen IS; Markowitz N; Matthay MA; Østergaard L; Chang CC; Davey VJ; Goodman A; Higgs ES; Murray DD; Murray TA; Paredes R; Parmar MKB; Phillips AN; Reilly C; Sharma S; Dewar RL; Teitelbaum M; Wentworth D; Cao H; Klekotka P; Babiker AG; Gelijns AC; Kan VL; Polizzotto MN; Thompson BT; Lane HC; Neaton JD, 2021, 'A neutralizing monoclonal antibody for hospitalized patients with Covid-19', New England Journal of Medicine, vol. 384, pp. 905 - 914, http://dx.doi.org/10.1056/NEJMoa2033130
    Journal articles | 2021
    Murray DD; Babiker AG; Baker J; Barkauskas CE; Brown SM; Chang CC; Davey VJ; Gelijns AC; Ginde AA; Grund B; Higgs E; Hudson F; Kan VL; Lane HC; Murray TA; Paredes R; Parmar MKB; Pett S; Phillips AN; Polizzotto MN; Reilly C; Sandkovsky U; Sharma S; Teitelbaum M; Thompson BT; Young BE; Neaton JD; Lundgren JD, 2021, 'Design and implementation of an international, multi-arm, multi-stage platform master protocol for trials of novel SARS-CoV-2 antiviral agents: Therapeutics for Inpatients with COVID-19 (TICO/ACTIV-3)', CLINICAL TRIALS, vol. 19, pp. 52 - 61, http://dx.doi.org/10.1177/17407745211049829
    Journal articles | 2021
    Murray DD; Zaunders J; Milliken ST; Mee Ling Munier C; Ford C; Orla Morrissey C; Visweswaran M; Avery S; Sasadeusz J; Kwan J; Desai S; Law M; Koelsch KK; Lewin SR; Moore J; Kelleher AD; Polizzotto MN, 2021, 'Altered Immune Reconstitution in Allogeneic Stem Cell Transplant Recipients with Human Immunodeficiency Virus (HIV)', Clinical Infectious Diseases, vol. 72, pp. 1141 - 1146, http://dx.doi.org/10.1093/cid/ciaa748
    Journal articles | 2020
    Ghazi L; Baker JV; Sharma S; Jain MK; Palfreeman A; Necsoi C; Murray DD; Neaton JD; Drawz PE, 2020, 'Role of inflammatory biomarkers in the prevalence and incidence of hypertension among HIV-positive participants in the START trial', American Journal of Hypertension, vol. 33, pp. 43 - 52, http://dx.doi.org/10.1093/ajh/hpz132
    Journal articles | 2020
    Ilett EE; Jørgensen M; Noguera-Julian M; Nørgaard JC; Daugaard G; Helleberg M; Paredes R; Murray DD; Lundgren J; MacPherson C; Reekie J; Sengeløv H, 2020, 'Associations of the gut microbiome and clinical factors with acute GVHD in allogeneic HSCT recipients', Blood Advances, vol. 4, pp. 5797 - 5809, http://dx.doi.org/10.1182/bloodadvances.2020002677
    Journal articles | 2019
    Ekenberg C; Tang MH; Zucco AG; Murray DD; Macpherson CR; Hu X; Sherman BT; Losso MH; Wood R; Paredes R; Molina JM; Helleberg M; Jina N; Kityo CM; Florence E; Polizzotto MN; Neaton JD; Lane HC; Lundgren JD, 2019, 'Association between Single-Nucleotide Polymorphisms in HLA Alleles and Human Immunodeficiency Virus Type 1 Viral Load in Demographically Diverse, Antiretroviral Therapy-Naive Participants from the Strategic Timing of AntiRetroviral Treatment Trial', Journal of Infectious Diseases, vol. 220, pp. 1325 - 1334, http://dx.doi.org/10.1093/infdis/jiz294
    Journal articles | 2019
    Ilett EE; Helleberg M; Reekie J; Murray DD; Wulff SM; Khurana MP; Mocroft A; Daugaard G; Perch M; Rasmussen A; Sørensen SS; Gustafsson F; Frimodt-Møller N; Sengeløv H; Lundgren J, 2019, 'Incidence Rates and Risk Factors of Clostridioides difficile Infection in Solid Organ and Hematopoietic Stem Cell Transplant Recipients', Open Forum Infectious Diseases, vol. 6, http://dx.doi.org/10.1093/ofid/ofz086
    Journal articles | 2019
    Ilett EE; Jørgensen M; Noguera-Julian M; Daugaard G; Murray DD; Helleberg M; Paredes R; Lundgren J; Sengeløv H; MacPherson C, 2019, 'Gut microbiome comparability of fresh-frozen versus stabilized-frozen samples from hospitalized patients using 16S rRNA gene and shotgun metagenomic sequencing', Scientific Reports, vol. 9, pp. 13351, http://dx.doi.org/10.1038/s41598-019-49956-7
    Journal articles | 2019
    Ilett EE; Reekie J; Jørgensen M; Murray DD; Noguera M; Paredes R; Nørgaard JC; Daugaard G; Helleberg M; Lundgren J; MacPherson C; Sengeløv H, 2019, '2569. The Gut Microbiome and Acute Graft vs. Host Disease Risk in Hematopoietic Stem Cell Transplantation Recipients', Open Forum Infectious Diseases, vol. 6, pp. S892 - S893, http://dx.doi.org/10.1093/ofid/ofz360.2247
    Journal articles | 2019
    Murray DD; Itenov TS; Sivapalan P; Eklöf JV; Holm FS; Schuetz P; Jensen JU, 2019, 'Biomarkers of acute lung injury the individualized approach: For phenotyping, risk stratification and treatment surveillance', Journal of Clinical Medicine, vol. 8, http://dx.doi.org/10.3390/jcm8081163
    Journal articles | 2018
    Ekenberg C; Tang M-HE; Murray DD; MacPherson C; Sherman BT; Losso M; Wood R; Paredes R; Molina J-M; Helleberg M; Jina N; Kityo CM; Florence E; Polizzotto MN; Neaton JD; Lane HC; Lundgren JD, 2018, '1284. Study of Single Nucleotide Polymorphisms Associated with HIV-1 Set-Point Viral Load in Antiretroviral Therapy-Naïve HIV-Positive Participants of the START Study', Open Forum Infectious Diseases, vol. 5, pp. S392 - S392, http://dx.doi.org/10.1093/ofid/ofy210.1117
    Journal articles | 2018
    Itenov TS; Murray DD; Jensen JUS, 2018, 'Sepsis: Personalized medicine utilizing ‘omic’ technologies-a paradigm shift?', Healthcare (Switzerland), vol. 6, http://dx.doi.org/10.3390/healthcare6030111
    Journal articles | 2017
    Murray DD; Suzuki K; Law M; Trebicka J; Neuhaus Nordwall J; Johnson M; Vjecha MJ; Kelleher AD; Emery S, 2017, 'Circulating MIR-122 and MIR-200a as biomarkers for fatal liver disease in ART-treated, HIV-1-infected individuals', Scientific Reports, vol. 7, http://dx.doi.org/10.1038/s41598-017-11405-8
    Journal articles | 2015
    Murray DD; Suzuki K; Law M; Trebicka J; Neuhaus J; Wentworth D; Johnson M; Vjecha MJ; Kelleher AD; Emery S; Aagaard B; Aragon E; Arnaiz J; Borup L; Clotet B; Dragsted U; Fau A; Gey D; Grarup J; Hengge U; Herrero P; Jansson P; Jensen B; Jensen K; Juncher H; Lopez P; Lundgren JD; Matthews C; Mollerup D; Pearson M; Phillips A; Reilev S; Tillmann K; Varea S; Angus B; Babiker A; Cordwell B; Darbyshire J; Dodds W; Fleck S; Horton J; Hudson F; Moraes Y; Pacciarini F; Palfreeman A; Paton N; Smith N; Van Hooff F; Bebchuk J; Collins G; Denning E; DuChene A; Fosdick L; Harrison M; Herman-Lamin K; Krum E; Larson G; Neaton J; Nelson R; Quan K; Quan S; Schultz T; Thompson G; Wyman N; Carey C; Chan F; Cooper D; Courtney-Rodgers D; Drummond F; Harrod M; Jacoby S; Kearney L; Lin E; Pett S; Robson R; Seneviratne N; Stewart M; Watts E; Finley E; Gordin F; Sánchez A; Standridge B; Belloso W; Davey R; Duprez D; Gatell J; Hoy J; Lifson A; Pederson C; Perez G; Price R; Prineas R; Rhame F; Sampson J; Worley J; Modlin J; Beral V; Chaisson R; Fleming T; Hill C, 2015, 'Circulating microRNAs in sera correlate with soluble biomarkers of immune activation but do not predict mortality in ART treated individuals with HIV-1 infection: A case control study', PLoS ONE, vol. 10, http://dx.doi.org/10.1371/journal.pone.0139981
    Journal articles | 2013
    Swaminathan S; Murray DD; Kelleher AD, 2013, 'Mirnas and HIV: Unforeseen Determinants Of Host-Pathogen Interaction', Immunological Reviews, vol. 254, pp. 265 - 280, http://dx.doi.org/10.1111/imr.12077Document
    Journal articles | 2012
    Swaminathan S; Kelleher AD; Murray DD, 2012, 'The role of microRNAs in HIV-1 pathogenesis and therapy', AIDS, vol. 26, pp. 1325 - 1334, http://dx.doi.org/10.1097/QAD.0b013e328352adca
    Journal articles | 2012
    Swaminathan S; Suzuki K; Seddiki N; Kaplan W; Cowley MJ; Hood CL; Clancy JL; Murray DD; Mendez Ortega C; Gelgor L; Anderson B; Roth N; Cooper DA; Kelleher AD, 2012, 'Differential regulation of the Let-7 family of microRNAs in CD4+ T cells alters IL-10 expression.', Journal of Immunology, vol. 188, pp. 6238 - 6246, http://dx.doi.org/10.4049/jimmunol.1101196
    Journal articles | 2011
    Suzuki K; Ishida T; Yamagishi M; Ahlenstiel C; Swaminathan S; Marks K; Murray D; McCartney EM; Beard MR; Alexander M; Purcell DF; Cooper DA; Watanabe T; Kelleher AD, 2011, 'Transcriptional gene silencing of HIV-1 through promoter targeted RNA is highly specific.', RNA biology, vol. 8, pp. 1035 - 1046
  • Preprints |
    Gelpi M; Mikaeloff F; Dehlbæk Knudsen A; Benfeitas R; Krishnan S; Høgh J; Murray DD; Ullum H; Neogi U; Dam Nielsen S, Central role of the glutamate metabolism in long-term antiretroviral treated HIV-infected individuals with metabolic syndrome: a cross-sectional cohort study, http://dx.doi.org/10.1101/2021.04.01.21254778
    Preprints |
    Lundgren JD; Grund B; Barkauskas CE; Holland TL; Gottlieb RL; Sandkovsky U; Brown SM; Knowlton KU; Self WH; Files DC; Jain MK; Benfield T; Bowdish ME; Leshnower BG; Baker JV; Jensen J-U; Gardner EM; Ginde AA; Harris ES; Johansen IS; Markowitz N; Matthay MA; Østergaard L; Chang CC; Goodman A; Chang W; Dewar RL; Gerry NP; Higgs ES; Highbarger H; Murray DD; Murray TA; Natarajan V; Paredes R; Parmar MKB; Phillips AN; Reilly C; Rupert AW; Sharma S; Shaw-Saliba K; Sherman BT; Teitelbaum M; Wentworth D; Cao H; Klekotka P; Babiker AG; Davey VJ; Gelijns AC; Kan VL; Polizzotto MN; Thompson BT; Lane HC; Neaton JD, Clinical and Virological Response to a Neutralizing Monoclonal Antibody for Hospitalized Patients with COVID-19, http://dx.doi.org/10.1101/2021.07.19.21260559
    Preprints |
    Villumsen SO; Benfeitas R; Dehlbæk Knudsen A; Gelpi M; Høgh J; Thomsen MT; Murray D; Ullum H; Neogi U; Nielsen SD, Integrative lipidomics and metabolomics for system-level understanding of the metabolic syndrome in long-term treated HIV-infected individuals, http://dx.doi.org/10.1101/2021.05.04.21256640