Dr Daniel Murray
Visiting Fellow

Dr Daniel Murray

Medicine & Health
The Kirby Institute
  • Journal articles | 2022
    Hertz FB; Ahlström MG; Bestle MH; Hein L; Mohr T; Lundgren JD; Galle T; Andersen MH; Murray D; Lindhardt A; Itenov TS; Jensen JUS, 2022, 'Early Biomarker-Guided Prediction of Bloodstream Infection in Critically Ill Patients: C-Reactive Protein, Procalcitonin, and Leukocytes.', Open Forum Infect Dis, vol. 9, pp. ofac467, http://dx.doi.org/10.1093/ofid/ofac467
    Journal articles | 2022
    Jørgensen M; Nørgaard JC; Ilett EE; Marandi RZ; Noguera-Julian M; Paredes R; Murray DD; Lundgren J; MacPherson CR; Sengeløv H, 2022, 'Metabolic Potential of the Gut Microbiome Is Significantly Impacted by Conditioning Regimen in Allogeneic Hematopoietic Stem Cell Transplantation Recipients', International Journal of Molecular Sciences, vol. 23, pp. 11115 - 11115, http://dx.doi.org/10.3390/ijms231911115
    Journal articles | 2022
    Kamstrup P; Sand JMB; Ulrik CS; Janner J; Rønn CP; Rønnow SR; Leeming DJ; Jensen SG; Wilcke T; Mathioudakis AG; Miravitlles M; Lapperre T; Bendstrup E; Frikke-Schmidt R; Murray DD; Itenov T; Bossios A; Nielsen SD; Vestbo J; Biering-Sørensen T; Karsdal M; Jensen JU; Sivapalan P, 2022, 'Biomarkers of Clot Activation and Degradation and Risk of Future Major Cardiovascular Events in Acute Exacerbation of COPD: A Cohort Sub-Study in a Randomized Trial Population', Biomedicines, vol. 10, http://dx.doi.org/10.3390/biomedicines10082011
    Journal articles | 2022
    Murray DD; Babiker AG; Baker JV; Barkauskas CE; Brown SM; Chang CC; Davey VJ; Gelijns AC; Ginde AA; Grund B; Higgs E; Hudson F; Kan VL; Lane HC; Murray TA; Paredes R; Parmar MKB; Pett S; Phillips AN; Polizzotto MN; Reilly C; Sandkovsky U; Sharma S; Teitelbaum M; Thompson BT; Young BE; Neaton JD; Lundgren JD, 2022, 'Design and implementation of an international, multi-arm, multi-stage platform master protocol for trials of novel SARS-CoV-2 antiviral agents: Therapeutics for Inpatients with COVID-19 (TICO/ACTIV-3)', Clinical Trials, vol. 19, pp. 52 - 61, http://dx.doi.org/10.1177/17407745211049829
    Journal articles | 2022
    Mørup SB; Nazaryan-Petersen L; Gabrielaite M; Reekie J; Marquart HV; Hartling HJ; Marvig RL; Katzenstein TL; Masmas TN; Lundgren J; Murray DD; Helleberg M; Borgwardt L, 2022, 'Added Value of Reanalysis of Whole Exome- and Whole Genome Sequencing Data From Patients Suspected of Primary Immune Deficiency Using an Extended Gene Panel and Structural Variation Calling', Frontiers in Immunology, vol. 13, pp. 906328, http://dx.doi.org/10.3389/fimmu.2022.906328
    Journal articles | 2022
    Olund Villumsen S; Benfeitas R; Knudsen AD; Gelpi M; Høgh J; Thomsen MT; Murray D; Ullum H; Neogi U; Nielsen SD, 2022, 'Integrative Lipidomics and Metabolomics for System-Level Understanding of the Metabolic Syndrome in Long-Term Treated HIV-Infected Individuals', Frontiers in Immunology, vol. 12, http://dx.doi.org/10.3389/fimmu.2021.742736
    Journal articles | 2022
    Polizzotto MN; Nordwall J; Babiker AG; Phillips A; Vock DM; Eriobu N; Kwaghe V; Paredes R; Mateu L; Ramachandruni S; Narang R; Jain MK; Lazarte SM; Baker JV; Frosch AEP; Poulakou G; Syrigos KN; Arnoczy GS; McBride NA; Robinson PA; Sarafian F; Bhagani S; Taha HS; Benfield T; Liu STH; Antoniadou A; Jensen JUS; Kalomenidis I; Susilo A; Hariadi P; Jensen MD TO; Morales-Rull JL; Helleberg M; Meegada S; Johansen IS; Canario D; Fernández-Cruz E; Metallidis S; Shah A; Sakurai A; Koulouris NG; Trotman R; Weintrob AC; Podlekareva D; Hadi U; Lloyd KM; Røge BT; Saito S; Sweerus K; Malin JJ; Lübbert C; Muñoz J; Cummings MJ; Losso MH; Turner D; Shaw-Saliba K; Dewar R; Highbarger H; Lallemand P; Rehman T; Gerry N; Arlinda D; Chang CC; Grund B; Holbrook MR; Holley HP; Hudson F; McNay LA; Murray DD; Pett SL; Shaughnessy M; Smolskis MC; Touloumi G; Wright ME; Doyle MK; Popik S; Hall C; Ramanathan R; Cao H; Mondou E; Willis T; Thakuria JV; Yel L; Higgs E; Kan VL; Lundgren JD; Neaton JD; Lane HC, 2022, 'Hyperimmune immunoglobulin for hospitalised patients with COVID-19 (ITAC): a double-blind, placebo-controlled, phase 3, randomised trial', The Lancet, vol. 399, pp. 530 - 540, http://dx.doi.org/10.1016/S0140-6736(22)00101-5
    Journal articles | 2021
    Ekenberg C; Reekie J; Zucco AG; Murray DD; Sharma S; Macpherson CR; Babiker A; Kan V; Lane HC; Neaton JD; Lundgren JD, 2021, 'The association of human leukocyte antigen alleles with clinical disease progression in HIV-positive cohorts with varied treatment strategies', AIDS (London, England), vol. 35, pp. 783 - 789, http://dx.doi.org/10.1097/QAD.0000000000002800
    Journal articles | 2021
    Gabrielaite M; Bennedbæk M; Zucco AG; Ekenberg C; Murray DD; Kan VL; Touloumi G; Vandekerckhove L; Turner D; Neaton J; Clifford Lane H; Safo S; Arenas-Pinto A; Polizzotto MN; Günthard HF; Lundgren JD; Marvig RL, 2021, 'Human Immunotypes Impose Selection on Viral Genotypes Through Viral Epitope Specificity', Journal of Infectious Diseases, vol. 224, pp. 2053 - 2063, http://dx.doi.org/10.1093/infdis/jiab253
    Journal articles | 2021
    Gelpi M; Mikaeloff F; Knudsen AD; Benfeitas R; Krishnan S; Akusjärvi SS; Høgh J; Murray DD; Ullum H; Neogi U; Nielsen SD, 2021, 'The central role of the glutamate metabolism in long-term antiretroviral treated HIV-infected individuals with metabolic syndrome', Aging, vol. 13, pp. 22732 - 22751, http://dx.doi.org/10.18632/aging.203622
    Journal articles | 2021
    Kalil AC; Patterson TF; Mehta AK; Tomashek KM; Wolfe CR; Ghazaryan V; Marconi VC; Ruiz-Palacios GM; Hsieh L; Kline S; Tapson V; Iovine NM; Jain MK; Sweeney DA; El Sahly HM; Branche AR; Pineda JR; Lye DC; Sandkovsky U; Luetkemeyer AF; Cohen SH; Finberg RW; Jackson PEH; Taiwo B; Paules CI; Arguinchona H; Erdmann N; Ahuja N; Frank M; Oh M; Kim E-S; Tan SY; Mularski RA; Nielsen H; Ponce PO; Taylor BS; Larson LA; Rouphael NG; Saklawi Y; Cantos VD; Ko ER; Engemann JJ; Amin AN; Watanabe M; Billings J; Elie M-C; Davey RT; Burgess TH; Ferreira J; Green M; Makowski M; Cardoso A; de Bono S; Bonnett T; Proschan M; Deye GA; Dempsey W; Nayak SU; Dodd LE; Beigel JH, 2021, 'Baricitinib plus Remdesivir for Hospitalized Adults with Covid-19', NEW ENGLAND JOURNAL OF MEDICINE, vol. 384, pp. 795 - 807, http://dx.doi.org/10.1056/NEJMoa2031994
    Journal articles | 2021
    Lundgren JD; Grund B; Barkauskas CE; Holland TL; Gottlieb RL; Sandkovsky U; Brown SM; Knowlton KU; Self WH; Files DC; Jain MK; Benfield T; Bowdish ME; Leshnower BG; Baker JV; Jensen JU; Gardner EM; Ginde AA; Harris ES; Johansen IS; Markowitz N; Matthay MA; Østergaard L; Chang CC; Davey VJ; Goodman A; Higgs ES; Murray DD; Murray TA; Paredes R; Parmar MKB; Phillips AN; Reilly C; Sharma S; Dewar RL; Teitelbaum M; Wentworth D; Cao H; Klekotka P; Babiker AG; Gelijns AC; Kan VL; Polizzotto MN; Thompson BT; Lane HC; Neaton JD, 2021, 'A neutralizing monoclonal antibody for hospitalized patients with Covid-19', New England Journal of Medicine, vol. 384, pp. 905 - 914, http://dx.doi.org/10.1056/NEJMoa2033130
    Journal articles | 2021
    Murray DD; Babiker AG; Baker J; Barkauskas CE; Brown SM; Chang CC; Davey VJ; Gelijns AC; Ginde AA; Grund B; Higgs E; Hudson F; Kan VL; Lane HC; Murray TA; Paredes R; Parmar MKB; Pett S; Phillips AN; Polizzotto MN; Reilly C; Sandkovsky U; Sharma S; Teitelbaum M; Thompson BT; Young BE; Neaton JD; Lundgren JD, 2021, 'Design and implementation of an international, multi-arm, multi-stage platform master protocol for trials of novel SARS-CoV-2 antiviral agents: Therapeutics for Inpatients with COVID-19 (TICO/ACTIV-3)', CLINICAL TRIALS, vol. 19, pp. 52 - 61, http://dx.doi.org/10.1177/17407745211049829
    Journal articles | 2021
    Murray DD; Zaunders J; Milliken ST; Mee Ling Munier C; Ford C; Orla Morrissey C; Visweswaran M; Avery S; Sasadeusz J; Kwan J; Desai S; Law M; Koelsch KK; Lewin SR; Moore J; Kelleher AD; Polizzotto MN, 2021, 'Altered Immune Reconstitution in Allogeneic Stem Cell Transplant Recipients with Human Immunodeficiency Virus (HIV)', Clinical Infectious Diseases, vol. 72, pp. 1141 - 1146, http://dx.doi.org/10.1093/cid/ciaa748
    Journal articles | 2020
    Ghazi L; Baker JV; Sharma S; Jain MK; Palfreeman A; Necsoi C; Murray DD; Neaton JD; Drawz PE, 2020, 'Role of inflammatory biomarkers in the prevalence and incidence of hypertension among HIV-positive participants in the START trial', American Journal of Hypertension, vol. 33, pp. 43 - 52, http://dx.doi.org/10.1093/ajh/hpz132
    Journal articles | 2020
    Ilett EE; Jørgensen M; Noguera-Julian M; Nørgaard JC; Daugaard G; Helleberg M; Paredes R; Murray DD; Lundgren J; MacPherson C; Reekie J; Sengeløv H, 2020, 'Associations of the gut microbiome and clinical factors with acute GVHD in allogeneic HSCT recipients', Blood Advances, vol. 4, pp. 5797 - 5809, http://dx.doi.org/10.1182/bloodadvances.2020002677
    Journal articles | 2019
    Ekenberg C; Tang MH; Zucco AG; Murray DD; Macpherson CR; Hu X; Sherman BT; Losso MH; Wood R; Paredes R; Molina JM; Helleberg M; Jina N; Kityo CM; Florence E; Polizzotto MN; Neaton JD; Lane HC; Lundgren JD, 2019, 'Association between Single-Nucleotide Polymorphisms in HLA Alleles and Human Immunodeficiency Virus Type 1 Viral Load in Demographically Diverse, Antiretroviral Therapy-Naive Participants from the Strategic Timing of AntiRetroviral Treatment Trial', Journal of Infectious Diseases, vol. 220, pp. 1325 - 1334, http://dx.doi.org/10.1093/infdis/jiz294
    Journal articles | 2019
    Ilett EE; Helleberg M; Reekie J; Murray DD; Wulff SM; Khurana MP; Mocroft A; Daugaard G; Perch M; Rasmussen A; Sørensen SS; Gustafsson F; Frimodt-Møller N; Sengeløv H; Lundgren J, 2019, 'Incidence Rates and Risk Factors of Clostridioides difficile Infection in Solid Organ and Hematopoietic Stem Cell Transplant Recipients', Open Forum Infectious Diseases, vol. 6, http://dx.doi.org/10.1093/ofid/ofz086
    Journal articles | 2019
    Ilett EE; Jørgensen M; Noguera-Julian M; Daugaard G; Murray DD; Helleberg M; Paredes R; Lundgren J; Sengeløv H; MacPherson C, 2019, 'Gut microbiome comparability of fresh-frozen versus stabilized-frozen samples from hospitalized patients using 16S rRNA gene and shotgun metagenomic sequencing', Scientific Reports, vol. 9, pp. 13351, http://dx.doi.org/10.1038/s41598-019-49956-7
    Journal articles | 2019
    Ilett EE; Reekie J; Jørgensen M; Murray DD; Noguera M; Paredes R; Nørgaard JC; Daugaard G; Helleberg M; Lundgren J; MacPherson C; Sengeløv H, 2019, '2569. The Gut Microbiome and Acute Graft vs. Host Disease Risk in Hematopoietic Stem Cell Transplantation Recipients', Open Forum Infectious Diseases, vol. 6, pp. S892 - S893, http://dx.doi.org/10.1093/ofid/ofz360.2247
    Journal articles | 2019
    Murray DD; Itenov TS; Sivapalan P; Eklöf JV; Holm FS; Schuetz P; Jensen JU, 2019, 'Biomarkers of acute lung injury the individualized approach: For phenotyping, risk stratification and treatment surveillance', Journal of Clinical Medicine, vol. 8, http://dx.doi.org/10.3390/jcm8081163
    Journal articles | 2018
    Ekenberg C; Tang M-HE; Murray DD; MacPherson C; Sherman BT; Losso M; Wood R; Paredes R; Molina J-M; Helleberg M; Jina N; Kityo CM; Florence E; Polizzotto MN; Neaton JD; Lane HC; Lundgren JD, 2018, '1284. Study of Single Nucleotide Polymorphisms Associated with HIV-1 Set-Point Viral Load in Antiretroviral Therapy-Naïve HIV-Positive Participants of the START Study', Open Forum Infectious Diseases, vol. 5, pp. S392 - S392, http://dx.doi.org/10.1093/ofid/ofy210.1117
    Journal articles | 2018
    Itenov TS; Murray DD; Jensen JUS, 2018, 'Sepsis: Personalized medicine utilizing ‘omic’ technologies-a paradigm shift?', Healthcare (Switzerland), vol. 6, http://dx.doi.org/10.3390/healthcare6030111
    Journal articles | 2017
    Murray DD; Suzuki K; Law M; Trebicka J; Neuhaus Nordwall J; Johnson M; Vjecha MJ; Kelleher AD; Emery S, 2017, 'Circulating MIR-122 and MIR-200a as biomarkers for fatal liver disease in ART-treated, HIV-1-infected individuals', Scientific Reports, vol. 7, http://dx.doi.org/10.1038/s41598-017-11405-8
    Journal articles | 2015
    Murray DD; Suzuki K; Law M; Trebicka J; Neuhaus J; Wentworth D; Johnson M; Vjecha MJ; Kelleher AD; Emery S; Aagaard B; Aragon E; Arnaiz J; Borup L; Clotet B; Dragsted U; Fau A; Gey D; Grarup J; Hengge U; Herrero P; Jansson P; Jensen B; Jensen K; Juncher H; Lopez P; Lundgren JD; Matthews C; Mollerup D; Pearson M; Phillips A; Reilev S; Tillmann K; Varea S; Angus B; Babiker A; Cordwell B; Darbyshire J; Dodds W; Fleck S; Horton J; Hudson F; Moraes Y; Pacciarini F; Palfreeman A; Paton N; Smith N; Van Hooff F; Bebchuk J; Collins G; Denning E; DuChene A; Fosdick L; Harrison M; Herman-Lamin K; Krum E; Larson G; Neaton J; Nelson R; Quan K; Quan S; Schultz T; Thompson G; Wyman N; Carey C; Chan F; Cooper D; Courtney-Rodgers D; Drummond F; Harrod M; Jacoby S; Kearney L; Lin E; Pett S; Robson R; Seneviratne N; Stewart M; Watts E; Finley E; Gordin F; Sánchez A; Standridge B; Belloso W; Davey R; Duprez D; Gatell J; Hoy J; Lifson A; Pederson C; Perez G; Price R; Prineas R; Rhame F; Sampson J; Worley J; Modlin J; Beral V; Chaisson R; Fleming T; Hill C, 2015, 'Circulating microRNAs in sera correlate with soluble biomarkers of immune activation but do not predict mortality in ART treated individuals with HIV-1 infection: A case control study', PLoS ONE, vol. 10, http://dx.doi.org/10.1371/journal.pone.0139981
    Journal articles | 2013
    Swaminathan S; Murray DD; Kelleher AD, 2013, 'Mirnas and HIV: Unforeseen Determinants Of Host-Pathogen Interaction', Immunological Reviews, vol. 254, pp. 265 - 280, http://dx.doi.org/10.1111/imr.12077Document
    Journal articles | 2012
    Swaminathan S; Kelleher AD; Murray DD, 2012, 'The role of microRNAs in HIV-1 pathogenesis and therapy', AIDS, vol. 26, pp. 1325 - 1334, http://dx.doi.org/10.1097/QAD.0b013e328352adca
    Journal articles | 2012
    Swaminathan S; Suzuki K; Seddiki N; Kaplan W; Cowley MJ; Hood CL; Clancy JL; Murray DD; Mendez Ortega C; Gelgor L; Anderson B; Roth N; Cooper DA; Kelleher AD, 2012, 'Differential regulation of the Let-7 family of microRNAs in CD4+ T cells alters IL-10 expression.', Journal of Immunology, vol. 188, pp. 6238 - 6246, http://dx.doi.org/10.4049/jimmunol.1101196
    Journal articles | 2011
    Suzuki K; Ishida T; Yamagishi M; Ahlenstiel C; Swaminathan S; Marks K; Murray D; McCartney EM; Beard MR; Alexander M; Purcell DF; Cooper DA; Watanabe T; Kelleher AD, 2011, 'Transcriptional gene silencing of HIV-1 through promoter targeted RNA is highly specific.', RNA biology, vol. 8, pp. 1035 - 1046
  • Preprints | 2022
    Mikaeloff F; Gelpi M; Benfeitas R; Knudsen AD; Vestad B; Høgh J; Hov JR; Benfield T; Murray D; Giske CG; Mardinoglu A; Trøseid M; Nielsen SD; Neogi U, 2022, Network-based multi-omics integration reveals metabolic at-risk profile within treated HIV-infection, http://dx.doi.org/10.1101/2022.06.08.495246
    Preprints | 2022
    Zucco AG; Bennedbæk M; Ekenberg C; Gabrielaite M; Leung P; Polizzotto MN; Kan V; Murray DD; Lundgren JD; Macpherson CR, 2022, Associations of functional HLA class I groups with HIV viral load in a heterogeneous cohort, http://dx.doi.org/10.1101/2022.06.21.22276431
    Preprints | 2021
    Gelpi M; Mikaeloff F; Dehlbæk Knudsen A; Benfeitas R; Krishnan S; Høgh J; Murray DD; Ullum H; Neogi U; Dam Nielsen S, 2021, Central role of the glutamate metabolism in long-term antiretroviral treated HIV-infected individuals with metabolic syndrome: a cross-sectional cohort study, http://dx.doi.org/10.1101/2021.04.01.21254778
    Preprints | 2021
    Lundgren JD; Grund B; Barkauskas CE; Holland TL; Gottlieb RL; Sandkovsky U; Brown SM; Knowlton KU; Self WH; Files DC; Jain MK; Benfield T; Bowdish ME; Leshnower BG; Baker JV; Jensen J-U; Gardner EM; Ginde AA; Harris ES; Johansen IS; Markowitz N; Matthay MA; Østergaard L; Chang CC; Goodman A; Chang W; Dewar RL; Gerry NP; Higgs ES; Highbarger H; Murray DD; Murray TA; Natarajan V; Paredes R; Parmar MKB; Phillips AN; Reilly C; Rupert AW; Sharma S; Shaw-Saliba K; Sherman BT; Teitelbaum M; Wentworth D; Cao H; Klekotka P; Babiker AG; Davey VJ; Gelijns AC; Kan VL; Polizzotto MN; Thompson BT; Lane HC; Neaton JD, 2021, Clinical and Virological Response to a Neutralizing Monoclonal Antibody for Hospitalized Patients with COVID-19, http://dx.doi.org/10.1101/2021.07.19.21260559
    Preprints | 2021
    Villumsen SO; Benfeitas R; Dehlbæk Knudsen A; Gelpi M; Høgh J; Thomsen MT; Murray D; Ullum H; Neogi U; Nielsen SD, 2021, Integrative lipidomics and metabolomics for system-level understanding of the metabolic syndrome in long-term treated HIV-infected individuals, http://dx.doi.org/10.1101/2021.05.04.21256640