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Dr Daniel Murray
Visiting Fellow

Dr Daniel Murray

Medicine & Health
The Kirby Institute
E-mail
dmurray@kirby.unsw.edu.au
  • Journal articles | 2023
    2023, 'Association between ten-eleven methylcytosine dioxygenase 2 genetic variation and viral load in people with HIV', AIDS, 37, pp. 379 - 387, http://dx.doi.org/10.1097/QAD.0000000000003427
    Journal articles | 2023
    2023, 'Associations of functional HLA class I groups with HIV viral load in a heterogeneous cohort', AIDS, Publish Ahead of Print, http://dx.doi.org/10.1097/qad.0000000000003557
    Journal articles | 2023
    2023, 'Network-based multi-omics integration reveals metabolic at-risk profile within treated HIV-infection', eLife, 12, http://dx.doi.org/10.7554/eLife.82785
    Journal articles | 2022
    2022, 'Added Value of Reanalysis of Whole Exome- and Whole Genome Sequencing Data From Patients Suspected of Primary Immune Deficiency Using an Extended Gene Panel and Structural Variation Calling', Frontiers in Immunology, 13, pp. 906328, http://dx.doi.org/10.3389/fimmu.2022.906328
    Journal articles | 2022
    2022, 'Biomarkers of Clot Activation and Degradation and Risk of Future Major Cardiovascular Events in Acute Exacerbation of COPD: A Cohort Sub-Study in a Randomized Trial Population', Biomedicines, 10, http://dx.doi.org/10.3390/biomedicines10082011
    Journal articles | 2022
    2022, 'Design and implementation of an international, multi-arm, multi-stage platform master protocol for trials of novel SARS-CoV-2 antiviral agents: Therapeutics for Inpatients with COVID-19 (TICO/ACTIV-3)', Clinical Trials, 19, pp. 52 - 61, http://dx.doi.org/10.1177/17407745211049829
    Journal articles | 2022
    2022, 'Early Biomarker-Guided Prediction of Bloodstream Infection in Critically Ill Patients: C-Reactive Protein, Procalcitonin, and Leukocytes', Open Forum Infectious Diseases, 9, pp. ofac467, http://dx.doi.org/10.1093/ofid/ofac467
    Journal articles | 2022
    2022, 'Hyperimmune immunoglobulin for hospitalised patients with COVID-19 (ITAC): a double-blind, placebo-controlled, phase 3, randomised trial', The Lancet, 399, pp. 530 - 540, http://dx.doi.org/10.1016/S0140-6736(22)00101-5
    Journal articles | 2022
    2022, 'Integrative Lipidomics and Metabolomics for System-Level Understanding of the Metabolic Syndrome in Long-Term Treated HIV-Infected Individuals', Frontiers in Immunology, 12, http://dx.doi.org/10.3389/fimmu.2021.742736
    Journal articles | 2022
    2022, 'Metabolic Potential of the Gut Microbiome Is Significantly Impacted by Conditioning Regimen in Allogeneic Hematopoietic Stem Cell Transplantation Recipients', International Journal of Molecular Sciences, 23, pp. 11115 - 11115, http://dx.doi.org/10.3390/ijms231911115
    Journal articles | 2021
    2021, 'A neutralizing monoclonal antibody for hospitalized patients with Covid-19', New England Journal of Medicine, 384, pp. 905 - 914, http://dx.doi.org/10.1056/NEJMoa2033130
    Journal articles | 2021
    2021, 'Altered Immune Reconstitution in Allogeneic Stem Cell Transplant Recipients with Human Immunodeficiency Virus (HIV)', Clinical Infectious Diseases, 72, pp. 1141 - 1146, http://dx.doi.org/10.1093/cid/ciaa748
    Journal articles | 2021
    2021, 'Baricitinib plus Remdesivir for Hospitalized Adults with Covid-19', NEW ENGLAND JOURNAL OF MEDICINE, 384, pp. 795 - 807, http://dx.doi.org/10.1056/NEJMoa2031994
    Journal articles | 2021
    2021, 'Design and implementation of an international, multi-arm, multi-stage platform master protocol for trials of novel SARS-CoV-2 antiviral agents: Therapeutics for Inpatients with COVID-19 (TICO/ACTIV-3)', CLINICAL TRIALS, 19, pp. 52 - 61, http://dx.doi.org/10.1177/17407745211049829
    Journal articles | 2021
    2021, 'Human Immunotypes Impose Selection on Viral Genotypes Through Viral Epitope Specificity', Journal of Infectious Diseases, 224, pp. 2053 - 2063, http://dx.doi.org/10.1093/infdis/jiab253
    Journal articles | 2021
    2021, 'The association of human leukocyte antigen alleles with clinical disease progression in HIV-positive cohorts with varied treatment strategies', AIDS, 35, pp. 783 - 789, http://dx.doi.org/10.1097/QAD.0000000000002800
    Journal articles | 2021
    2021, 'The central role of the glutamate metabolism in long-term antiretroviral treated HIV-infected individuals with metabolic syndrome', Aging, 13, pp. 22732 - 22751, http://dx.doi.org/10.18632/aging.203622
    Journal articles | 2020
    2020, 'Associations of the gut microbiome and clinical factors with acute GVHD in allogeneic HSCT recipients', Blood Advances, 4, pp. 5797 - 5809, http://dx.doi.org/10.1182/bloodadvances.2020002677
    Journal articles | 2020
    2020, 'Role of inflammatory biomarkers in the prevalence and incidence of hypertension among HIV-positive participants in the START trial', American Journal of Hypertension, 33, pp. 43 - 52, http://dx.doi.org/10.1093/ajh/hpz132
    Journal articles | 2019
    2019, '2569. The Gut Microbiome and Acute Graft vs. Host Disease Risk in Hematopoietic Stem Cell Transplantation Recipients', Open Forum Infectious Diseases, 6, pp. S892 - S893, http://dx.doi.org/10.1093/ofid/ofz360.2247
    Journal articles | 2019
    2019, 'Association between Single-Nucleotide Polymorphisms in HLA Alleles and Human Immunodeficiency Virus Type 1 Viral Load in Demographically Diverse, Antiretroviral Therapy-Naive Participants from the Strategic Timing of AntiRetroviral Treatment Trial', Journal of Infectious Diseases, 220, pp. 1325 - 1334, http://dx.doi.org/10.1093/infdis/jiz294
    Journal articles | 2019
    2019, 'Biomarkers of acute lung injury the individualized approach: For phenotyping, risk stratification and treatment surveillance', Journal of Clinical Medicine, 8, http://dx.doi.org/10.3390/jcm8081163
    Journal articles | 2019
    2019, 'Gut microbiome comparability of fresh-frozen versus stabilized-frozen samples from hospitalized patients using 16S rRNA gene and shotgun metagenomic sequencing', Scientific Reports, 9, pp. 13351, http://dx.doi.org/10.1038/s41598-019-49956-7
    Journal articles | 2019
    2019, 'Incidence Rates and Risk Factors of Clostridioides difficile Infection in Solid Organ and Hematopoietic Stem Cell Transplant Recipients', Open Forum Infectious Diseases, 6, http://dx.doi.org/10.1093/ofid/ofz086
    Journal articles | 2018
    2018, '1284. Study of Single Nucleotide Polymorphisms Associated with HIV-1 Set-Point Viral Load in Antiretroviral Therapy-Naïve HIV-Positive Participants of the START Study', Open Forum Infectious Diseases, 5, pp. S392 - S392, http://dx.doi.org/10.1093/ofid/ofy210.1117
    Journal articles | 2018
    2018, 'Sepsis: Personalized medicine utilizing ‘omic’ technologies-a paradigm shift?', Healthcare (Switzerland), 6, http://dx.doi.org/10.3390/healthcare6030111
    Journal articles | 2017
    Murray DD; Suzuki K; Law M; Trebicka J; Neuhaus Nordwall J; Johnson M; Vjecha MJ; Kelleher AD; Emery S, 2017, 'Circulating MIR-122 and MIR-200a as biomarkers for fatal liver disease in ART-treated, HIV-1-infected individuals', Scientific Reports, 7, http://dx.doi.org/10.1038/s41598-017-11405-8
    Journal articles | 2015
    Murray DD; Suzuki K; Law M; Trebicka J; Neuhaus J; Wentworth D; Johnson M; Vjecha MJ; Kelleher AD; Emery S; Aagaard B; Aragon E; Arnaiz J; Borup L; Clotet B; Dragsted U; Fau A; Gey D; Grarup J; Hengge U; Herrero P; Jansson P; Jensen B; Jensen K; Juncher H; Lopez P; Lundgren JD; Matthews C; Mollerup D; Pearson M; Phillips A; Reilev S; Tillmann K; Varea S; Angus B; Babiker A; Cordwell B; Darbyshire J; Dodds W; Fleck S; Horton J; Hudson F; Moraes Y; Pacciarini F; Palfreeman A; Paton N; Smith N; Van Hooff F; Bebchuk J; Collins G; Denning E; DuChene A; Fosdick L; Harrison M; Herman-Lamin K; Krum E; Larson G; Neaton J; Nelson R; Quan K; Quan S; Schultz T; Thompson G; Wyman N; Carey C; Chan F; Cooper D; Courtney-Rodgers D; Drummond F; Harrod M; Jacoby S; Kearney L; Lin E; Pett S; Robson R; Seneviratne N; Stewart M; Watts E; Finley E; Gordin F; Sánchez A; Standridge B; Belloso W; Davey R; Duprez D; Gatell J; Hoy J; Lifson A; Pederson C; Perez G; Price R; Prineas R; Rhame F; Sampson J; Worley J; Modlin J; Beral V; Chaisson R; Fleming T; Hill C, 2015, 'Circulating microRNAs in sera correlate with soluble biomarkers of immune activation but do not predict mortality in ART treated individuals with HIV-1 infection: A case control study', PLoS ONE, 10, http://dx.doi.org/10.1371/journal.pone.0139981
    Journal articles | 2013
    2013, 'Mirnas and HIV: Unforeseen Determinants Of Host-Pathogen Interaction', Immunological Reviews, 254, pp. 265 - 280, http://dx.doi.org/10.1111/imr.12077Document
    Journal articles | 2012
    2012, 'Differential regulation of the Let-7 family of microRNAs in CD4+ T cells alters IL-10 expression.', Journal of Immunology, 188, pp. 6238 - 6246, http://dx.doi.org/10.4049/jimmunol.1101196
    Journal articles | 2012
    2012, 'The role of microRNAs in HIV-1 pathogenesis and therapy', AIDS, 26, pp. 1325 - 1334, http://dx.doi.org/10.1097/QAD.0b013e328352adca
    Journal articles | 2011
    Suzuki K; Ishida T; Yamagishi M; Ahlenstiel C; Swaminathan S; Marks K; Murray D; McCartney EM; Beard MR; Alexander M; Purcell DF; Cooper DA; Watanabe T; Kelleher AD, 2011, 'Transcriptional gene silencing of HIV-1 through promoter targeted RNA is highly specific.', RNA biology, 8, pp. 1035 - 1046
  • Conference Papers | 2022
    2022, 'Biomarkers of coagulative properties in patients admitted with AECOPD.', in 05.02 - Monitoring airway disease, European Respiratory Society, presented at ERS International Congress 2022 abstracts, http://dx.doi.org/10.1183/13993003.congress-2022.3570
    Preprints | 2022
    2022, Associations of functional HLA class I groups with HIV viral load in a heterogeneous cohort, , http://dx.doi.org/10.1101/2022.06.21.22276431
    Preprints | 2022
    2022, Network-based multi-omics integration reveals metabolic at-risk profile within treated HIV-infection, , http://dx.doi.org/10.1101/2022.06.08.495246
    Preprints | 2021
    2021, Central role of the glutamate metabolism in long-term antiretroviral treated HIV-infected individuals with metabolic syndrome: a cross-sectional cohort study, , http://dx.doi.org/10.1101/2021.04.01.21254778
    Preprints | 2021
    2021, Clinical and Virological Response to a Neutralizing Monoclonal Antibody for Hospitalized Patients with COVID-19, , http://dx.doi.org/10.1101/2021.07.19.21260559
    Preprints | 2021
    2021, Integrative lipidomics and metabolomics for system-level understanding of the metabolic syndrome in long-term treated HIV-infected individuals, , http://dx.doi.org/10.1101/2021.05.04.21256640