Jason is a principal research scientist at Australia's national science agency. He leads the CSIRO intelligent imaging team (based at the Australian e-Health Research Centre, Royal Brisbane and Women's Hospital, Australia).
2014, Medical Computer Vision: Algorithms for Big Data: International Workshop, MCV 2014 Held in Conjunction with MICCAI 2014 Cambridge, MA, USA, September 18, 2014 Revised Selected Papers, Springer International Publishing, http://dx.doi.org/10.1007/978-3-319-13972-2
Books | 2010
Madabhushi A; Dowling J; Yan P; Fenster A; Abolmaesumi P; Hata N, 2010, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics): Preface
Books | 2010
2010, Prostate Cancer Imaging. Computer-Aided Diagnosis, Prognosis, and Intervention, Madabhushi A; Dowling J; Yan P; Fenster A; Abolmaesumi P; Hata N, (eds.), Springer Berlin Heidelberg, http://dx.doi.org/10.1007/978-3-642-15989-3
Book Chapters | 2022
2022, 'Image synthesis for MRI-only radiotherapy treatment planning', in Biomedical Image Synthesis and Simulation: Methods and Applications, Elsevier, pp. 423 - 445, http://dx.doi.org/10.1016/B978-0-12-824349-7.00027-X
Book Chapters | 2022
2022, 'ImageCLEF 2021 Best of Labs: The Curious Case of Caption Generation for Medical Images', in Lecture Notes in Computer Science, Springer International Publishing, pp. 190 - 203, http://dx.doi.org/10.1007/978-3-031-13643-6_15
Book Chapters | 2019
2019, 'MR-Only Methodology', in MRI for Radiotherapy: Planning, Delivery, and Response Assessment, Springer International Publishing, pp. 131 - 151, http://dx.doi.org/10.1007/978-3-030-14442-5_9
Book Chapters | 2014
Acosta O; Dowling J; Drean G; Simon A; De Crevoisier R; Haigron P, 2014, 'Multi-atlas-based segmentation of pelvic structures from ct scans for planning in prostate cancer radiotherapy', in Abdomen and Thoracic Imaging: An Engineering and Clinical Perspective, pp. 623 - 656, http://dx.doi.org/10.1007/978-1-4614-8498-1_24
Book Chapters | 2014
2014, 'Structure-Guided Nonrigid Registration of CT–MR Pelvis Scans with Large Deformations in MR-Based Image Guided Radiation Therapy', in Clinical Image-Based Procedures. Translational Research in Medical Imaging, Springer International Publishing, pp. 65 - 73, http://dx.doi.org/10.1007/978-3-319-14127-5_9
Book Chapters | 2008
Dowling J; Boles W; Maeder A, 2008, 'Visual prostheses for the blind: A framework for information presentation', in Mechatronics and Machine Vision in Practice, pp. 275 - 287, http://dx.doi.org/10.1007/978-3-540-74027-8_24
2023, 'Investigation of a water equivalent depth method for dosimetric accuracy evaluation of synthetic CT', Physica Medica, 105, pp. 102507, http://dx.doi.org/10.1016/j.ejmp.2022.11.011
Journal articles | 2023
2023, 'Open-source, fully-automated hybrid cardiac substructure segmentation: development and optimisation', Physical and Engineering Sciences in Medicine, 46, pp. 377 - 393, http://dx.doi.org/10.1007/s13246-023-01231-w
Journal articles | 2023
2023, 'Validation of a Fully Automated Hybrid Deep Learning Cardiac Substructure Segmentation Tool for Contouring and Dose Evaluation in Lung Cancer Radiotherapy', Clinical Oncology, http://dx.doi.org/10.1016/j.clon.2023.03.005
Journal articles | 2022
2022, 'A Novel Machine Learning Technique for Detecting the Left Atrium With Limited Labelled Training Data', Heart, Lung and Circulation, 31, pp. S141 - S141, http://dx.doi.org/10.1016/j.hlc.2022.06.212
Journal articles | 2022
2022, 'A high-performance method of deep learning for prostate MR-only radiotherapy planning using an optimized Pix2Pix architecture', Physica Medica, 103, pp. 108 - 118, http://dx.doi.org/10.1016/j.ejmp.2022.10.003
Journal articles | 2022
2022, 'A statistical, voxelised model of prostate cancer for biologically optimised radiotherapy', Physics and Imaging in Radiation Oncology, 21, pp. 136 - 145, http://dx.doi.org/10.1016/j.phro.2022.02.011
Journal articles | 2022
2022, 'Assessing the impact of magnetic resonance treatment simulation (MRSIM) on target volume delineation and dose to organs at risk for oropharyngeal radiotherapy', Journal of Medical Radiation Sciences, 69, pp. 66 - 74, http://dx.doi.org/10.1002/jmrs.552
Journal articles | 2022
2022, 'Automated COVID-19 diagnosis and prognosis with medical imaging and who is publishing: a systematic review', Physical and Engineering Sciences in Medicine, 45, pp. 13 - 29, http://dx.doi.org/10.1007/s13246-021-01093-0
Journal articles | 2022
2022, 'Automatic deep learning-based consolidation/collapse classification in lung ultrasound images for COVID-19 induced pneumonia', Scientific Reports, 12, http://dx.doi.org/10.1038/s41598-022-22196-y
2022, 'Comparison of Synthetic Computed Tomography Generation Methods, Incorporating Male and Female Anatomical Differences, for Magnetic Resonance Imaging-Only Definitive Pelvic Radiotherapy', Frontiers in Oncology, 12, http://dx.doi.org/10.3389/fonc.2022.822687
2022, 'Quality assurance for MRI-only radiation therapy: A voxel-wise population-based methodology for image and dose assessment of synthetic CT generation methods', Frontiers in Oncology, 12, http://dx.doi.org/10.3389/fonc.2022.968689
Journal articles | 2022
2022, 'Terrestrial Analogue Research to Support Human Performance on Mars: A Review and Bibliographic Analysis', Space: Science and Technology (United States), 2022, http://dx.doi.org/10.34133/2022/9841785
Journal articles | 2022
2022, 'Training radiomics-based CNNs for clinical outcome prediction: Challenges, strategies and findings', Artificial Intelligence in Medicine, 123, http://dx.doi.org/10.1016/j.artmed.2021.102230
2021, 'A review of medical image data augmentation techniques for deep learning applications', Journal of Medical Imaging and Radiation Oncology, 65, pp. 545 - 563, http://dx.doi.org/10.1111/1754-9485.13261
Journal articles | 2021
2021, 'Assessing tumor centrality in lung stereotactic ablative body radiotherapy (SABR): the effects of variations in bronchial tree delineation and potential for automated methods', Medical Dosimetry, 46, pp. 94 - 101, http://dx.doi.org/10.1016/j.meddos.2020.09.004
Journal articles | 2021
2021, 'Automated Cardiac Evaluation From Chest CT: Potential Role in COVID-19', Heart, Lung and Circulation, 30, pp. S175 - S176, http://dx.doi.org/10.1016/j.hlc.2021.06.186
Journal articles | 2021
2021, 'Automatic deep learning-based pleural effusion classification in lung ultrasound images for respiratory pathology diagnosis', Physica Medica, 83, pp. 38 - 45, http://dx.doi.org/10.1016/j.ejmp.2021.02.023
Journal articles | 2021
2021, 'Automatic radiotherapy delineation quality assurance on prostate MRI with deep learning in a multicentre clinical trial', Physics in Medicine and Biology, 66, http://dx.doi.org/10.1088/1361-6560/ac25d5
Journal articles | 2021
2021, 'Calcul de dose à partir d’IRM en radiothérapie de la prostate par méthode d’apprentissage profond', Cancer/Radiothérapie, 25, pp. 736 - 737, http://dx.doi.org/10.1016/j.canrad.2021.07.021
Journal articles | 2021
2021, 'Deep learning for segmentation in radiation therapy planning: a review', Journal of Medical Imaging and Radiation Oncology, 65, pp. 578 - 595, http://dx.doi.org/10.1111/1754-9485.13286
Journal articles | 2021
2021, 'Effects of MR imaging time reduction on substitute CT generation for prostate MRI-only treatment planning', Physical and Engineering Sciences in Medicine, 44, pp. 799 - 807, http://dx.doi.org/10.1007/s13246-021-01031-0
Journal articles | 2021
2021, 'Feasibility of using a novel automatic cardiac segmentation algorithm in the clinical routine of lung cancer patients', PLoS ONE, 16, pp. e0245364 - e0245364, http://dx.doi.org/10.1371/journal.pone.0245364
2021, 'Measurements of human tolerance to horizontal rotation within an MRI scanner: Towards gantry-free radiation therapy', Journal of Medical Imaging and Radiation Oncology, 65, pp. 112 - 119, http://dx.doi.org/10.1111/1754-9485.13130
Journal articles | 2021
2021, 'Optimisation and validation of an integrated magnetic resonance imaging-only radiotherapy planning solution', Physics and Imaging in Radiation Oncology, 20, pp. 34 - 39, http://dx.doi.org/10.1016/j.phro.2021.10.001
Journal articles | 2021
2021, 'PO-1683 Spatial Characterization of errors in pseudo-CT generation for MRI-only radiotherapy', Radiotherapy and Oncology, 161, pp. S1408 - S1410, http://dx.doi.org/10.1016/s0167-8140(21)08134-2
Journal articles | 2021
2021, 'Pelvic organ motion and dosimetric implications during horizontal patient rotation for prostate radiation therapy', Medical Physics, 48, pp. 397 - 413, http://dx.doi.org/10.1002/mp.14579
Journal articles | 2021
2021, 'Quantification Of Cardiac Chamber Size From Chest CT: Application To COVID19', Journal of Cardiovascular Computed Tomography, 15, pp. S27 - S27, http://dx.doi.org/10.1016/j.jcct.2021.06.216
Journal articles | 2021
2021, 'Validation of a new open-source method for automatic delineation and dose assessment of the heart and LADCA in breast radiotherapy with simultaneous uncertainty estimation', Physics in Medicine and Biology, 66, http://dx.doi.org/10.1088/1361-6560/abcb1d
Journal articles | 2020
2020, 'Analysis of cardiac substructure dose in a large, multi-centre danish breast cancer cohort (the DBCG HYPO trial): Trends and predictive modelling', Radiotherapy and Oncology, 153, pp. 130 - 138, http://dx.doi.org/10.1016/j.radonc.2020.09.004
Journal articles | 2020
2020, 'Deformable image registration in radiation therapy', Journal of Medical Radiation Sciences, 67, pp. 257 - 259, http://dx.doi.org/10.1002/jmrs.446
Journal articles | 2020
2020, 'Generalisable 3D Fabric Architecture for Streamlined Universal
Multi-Dataset Medical Image Segmentation', , http://arxiv.org/abs/2006.15578v4
Journal articles | 2020
2020, 'Increased Dose to Organs in Urinary Tract Associates With Measures of Genitourinary Toxicity in Pooled Voxel-Based Analysis of 3 Randomized Phase III Trials', Frontiers in Oncology, 10, http://dx.doi.org/10.3389/fonc.2020.01174
Journal articles | 2020
2020, 'Localised delineation uncertainty for iterative atlas selection in automatic cardiac segmentation', Physics in Medicine and Biology, 65, pp. 035011, http://dx.doi.org/10.1088/1361-6560/ab652a
Journal articles | 2020
2020, 'PO-1484: MRI only based planning to decrease toxicity in prostate cancer IMRT/IGRT: a dosimetric study', Radiotherapy and Oncology, 152, pp. S798 - S799, http://dx.doi.org/10.1016/s0167-8140(21)01502-4
Journal articles | 2020
2020, 'Reduced Dose Posterior to Prostate Correlates With Increased PSA Progression in Voxel-Based Analysis of 3 Randomized Phase 3 Trials', International Journal of Radiation Oncology Biology Physics, 108, pp. 1304 - 1318, http://dx.doi.org/10.1016/j.ijrobp.2020.07.030
Journal articles | 2020
2020, 'Relationships between rectal and perirectal doses and rectal bleeding or tenesmus in pooled voxel-based analysis of 3 randomised phase III trials', Radiotherapy and Oncology, 150, pp. 281 - 292, http://dx.doi.org/10.1016/j.radonc.2020.07.048
Journal articles | 2020
2020, 'Variations of Clinical Target Volume Delineation for Primary Site of Nasopharyngeal Cancer Among Five Centers in China', Frontiers in Oncology, 10, http://dx.doi.org/10.3389/fonc.2020.01572
Journal articles | 2020
2020, 'Voxel-based supervised machine learning of peripheral zone prostate cancer using noncontrast multiparametric MRI', Journal of Applied Clinical Medical Physics, 21, pp. 179 - 191, http://dx.doi.org/10.1002/acm2.12992
Journal articles | 2019
2019, '45 A comparison of pseudo-CT generation methods for prostate MRI-based dose planning: deep learning, patch-based, atlas-based and bulk-density methods', Physica Medica, 68, pp. 28 - 28, http://dx.doi.org/10.1016/j.ejmp.2019.09.126
Journal articles | 2019
2019, 'A multi-center prospective study for implementation of an MRI-only prostate treatment planning workflow', Frontiers in Oncology, 9, http://dx.doi.org/10.3389/fonc.2019.00826
Journal articles | 2019
2019, 'Anatomical deformation due to horizontal rotation: Towards gantry-free radiation therapy', Physics in Medicine and Biology, 64, pp. 175014, http://dx.doi.org/10.1088/1361-6560/ab324c
Journal articles | 2019
2019, 'Bulk Anatomical Density Based Dose Calculation for Patient-Specific Quality Assurance of MRI-Only Prostate Radiotherapy', Frontiers in Oncology, 9, http://dx.doi.org/10.3389/fonc.2019.00997
Journal articles | 2019
2019, 'Calcul de dose direct à partir d’IRM et tomographies coniques par méthodes d’apprentissage', Cancer/Radiothérapie, 23, pp. 798 - 799, http://dx.doi.org/10.1016/j.canrad.2019.07.025
Journal articles | 2019
2019, 'Characterization of prostate cancer using diffusion tensor imaging: A new perspective', European Journal of Radiology, 110, pp. 112 - 120, http://dx.doi.org/10.1016/j.ejrad.2018.11.026
Journal articles | 2019
2019, 'Comparison of Deep Learning-Based and Patch-Based Methods for Pseudo-CT Generation in MRI-Based Prostate Dose Planning', International Journal of Radiation Oncology Biology Physics, 105, pp. 1137 - 1150, http://dx.doi.org/10.1016/j.ijrobp.2019.08.049
Journal articles | 2019
2019, 'Dedicated MRI simulation for cervical cancer radiation treatment planning: Assessing the impact on clinical target volume delineation', Journal of Medical Imaging and Radiation Oncology, 63, pp. 236 - 243, http://dx.doi.org/10.1111/1754-9485.12831
Journal articles | 2019
2019, 'Feasibility of Using a Novel Automatic Cardiac Segmentation Algorithm in the Clinical Routine of Lung Cancer Patients', International Journal of Radiation Oncology*Biology*Physics, 105, pp. E724 - E725, http://dx.doi.org/10.1016/j.ijrobp.2019.06.906
Journal articles | 2019
2019, 'Feasibility of multi-atlas cardiac segmentation from thoracic planning CT in a probabilistic framework', Physics in Medicine and Biology, 64, pp. 085006, http://dx.doi.org/10.1088/1361-6560/ab0ea6
Journal articles | 2019
2019, 'Multi-observer contouring of male pelvic anatomy: Highly variable agreement across conventional and emerging structures of interest', Journal of Medical Imaging and Radiation Oncology, 63, pp. 264 - 271, http://dx.doi.org/10.1111/1754-9485.12844
Journal articles | 2019
2019, 'OC-049: Avoiding garbage in: A consensus workshop for refining gastric cancer radiotherapy atlas data', Radiotherapy and Oncology, 141, pp. S20 - S21, http://dx.doi.org/10.1016/s0167-8140(20)30438-2
2019, 'Pseudo-CT Generation for MRI-Only Radiation Therapy Treatment Planning: Comparison Among Patch-Based, Atlas-Based, and Bulk Density Methods', International Journal of Radiation Oncology Biology Physics, 103, pp. 479 - 490, http://dx.doi.org/10.1016/j.ijrobp.2018.10.002
Journal articles | 2019
2019, 'Reduced motion and improved rectal dosimetry through endorectal immobilization for prostate stereotactic body radiotherapy', British Journal of Radiology, 92, pp. 20190056, http://dx.doi.org/10.1259/bjr.20190056
Journal articles | 2019
2019, 'Similarity clustering-based atlas selection for pelvic CT image segmentation', Medical Physics, 46, pp. 2243 - 2250, http://dx.doi.org/10.1002/mp.13494
Journal articles | 2019
2019, 'TROG 18.01 phase III randomised clinical trial of the Novel Integration of New prostate radiation schedules with adJuvant Androgen deprivation: NINJA study protocol', BMJ Open, 9, pp. e030731, http://dx.doi.org/10.1136/bmjopen-2019-030731
Journal articles | 2018
Arabi H; Dowling JA; Burgos N; Han X; Greer PB; Koutsouvelis N; Zaidi H, 2018, 'Comparative study of algorithms for synthetic CT generation from MRI: Consequences for MRI-guided radiation planning in the pelvic region', Medical Physics, 45, pp. 5218 - 5233, http://dx.doi.org/10.1002/mp.13187
Kennedy A; Dowling J; Greer PB; Ebert MA, 2018, 'Estimation of Hounsfield unit conversion parameters for pelvic CT images', Australasian Physical and Engineering Sciences in Medicine, 41, pp. 739 - 745, http://dx.doi.org/10.1007/s13246-018-0651-x
Journal articles | 2018
Roach D; Jameson MG; Dowling JA; Ebert MA; Greer PB; Kennedy AM; Watt S; Holloway LC, 2018, 'Correlations between contouring similarity metrics and simulated treatment outcome for prostate radiotherapy', Physics in Medicine and Biology, 63, http://dx.doi.org/10.1088/1361-6560/aaa50c
Journal articles | 2018
2018, '29 Pseudo-CT generation for MRI-only radiotherapy treatment planning: comparison between patch-based, atlas-based and bulk density methods', Physica Medica, 56, pp. 17 - 18, http://dx.doi.org/10.1016/j.ejmp.2018.09.042
Journal articles | 2018
2018, 'Calcul de dose à partir d’IRM en radiothérapie de la prostate : comparaison de trois méthodes de génération de pseudo-scanographie', Cancer/Radiothérapie, 22, pp. 704 - 705, http://dx.doi.org/10.1016/j.canrad.2018.07.036
2018, 'EPSM 2017, Engineering and Physical Sciences in Medicine', Australasian Physical & Engineering Sciences in Medicine, 41, pp. 245 - 355, http://dx.doi.org/10.1007/s13246-017-0614-7
Journal articles | 2017
Ghose S; Dowling JA; Rai R; Liney GP, 2017, 'Substitute CT generation from a single ultra short time echo MRI sequence: Preliminary study', Physics in Medicine and Biology, 62, pp. 2950 - 2960, http://dx.doi.org/10.1088/1361-6560/aa508a
Journal articles | 2017
Ghose S; Greer PB; Sun J; Pichler P; Rivest-Henault D; Mitra J; Richardson H; Wratten C; Martin J; Arm J; Best L; Dowling JA, 2017, 'Regression and statistical shape model based substitute CT generation for MRI alone external beam radiation therapy from standard clinical MRI sequences', Physics in Medicine and Biology, 62, pp. 8566 - 8580, http://dx.doi.org/10.1088/1361-6560/aa9104
Journal articles | 2017
Koivula L; Kapanen M; Seppälä T; Collan J; Dowling JA; Greer PB; Gustafsson C; Gunnlaugsson A; Olsson LE; Wee L; Korhonen J, 2017, 'Intensity-based dual model method for generation of synthetic CT images from standard T2-weighted MR images – Generalized technique for four different MR scanners', Radiotherapy and Oncology, 125, pp. 411 - 419, http://dx.doi.org/10.1016/j.radonc.2017.10.011
Journal articles | 2017
Whelan B; Liney GP; Dowling JA; Rai R; Holloway L; McGarvie L; Feain I; Barton M; Berry M; Wilkins R; Keall P, 2017, 'An MRI-compatible patient rotation system - Design, construction, and first organ deformation results:', Medical Physics, 44, pp. 581 - 588, http://dx.doi.org/10.1002/mp.12065
Journal articles | 2017
Wyatt JJ; Dowling JA; Kelly CG; McKenna J; Johnstone E; Speight R; Henry A; Greer PB; McCallum HM, 2017, 'Investigating the generalisation of an atlas-based synthetic-CT algorithm to another centre and MR scanner for prostate MR-only radiotherapy', Physics in Medicine and Biology, 62, pp. N548 - N560, http://dx.doi.org/10.1088/1361-6560/aa9676
Journal articles | 2017
2017, 'Intensity based synthetic CT generation from standard T2-weighted MR images with three MR scanners', RADIOTHERAPY AND ONCOLOGY, 123, pp. S233 - S234, http://dx.doi.org/10.1016/S0167-8140(17)30884-8
Journal articles | 2017
2017, 'Radiotherapy dose-distribution to the perirectal fat space (PRS) is related to gastrointestinal control-related complications', Clinical and Translational Radiation Oncology, 7, pp. 62 - 70, http://dx.doi.org/10.1016/j.ctro.2017.10.002
Journal articles | 2016
Chandra SS; Dowling JA; Greer PB; Martin J; Wratten C; Pichler P; Fripp J; Crozier S, 2016, 'Fast automated segmentation of multiple objects via spatially weighted shape learning', Physics in Medicine and Biology, 61, pp. 8070 - 8084, http://dx.doi.org/10.1088/0031-9155/61/22/8070
Journal articles | 2016
Ghose S; Denham JW; Ebert MA; Kennedy A; Mitra J; Dowling JA, 2016, 'Multi-atlas and unsupervised learning approach to perirectal space segmentation in CT images', Australasian Physical and Engineering Sciences in Medicine, 39, pp. 933 - 941, http://dx.doi.org/10.1007/s13246-016-0496-0
2016, 'EPSM2015, Engineering and Physical Sciences in Medicine : Museum of New Zealand Te Papa Tongarewa, Wellington, 8-12 November 2015, Conference abstracts.', Australas Phys Eng Sci Med, 39, pp. 259 - 354, http://dx.doi.org/10.1007/s13246-015-0410-1
Journal articles | 2015
De Leon JF; Jameson MG; Windsor A; Cloak K; Keats S; Vial P; Holloway L; Metcalfe P; Sidhom M, 2015, 'Superior target volume and organ stability with the use of endorectal balloons in post-prostatectomy radiotherapy', Journal of Medical Imaging and Radiation Oncology, 59, pp. 507 - 513, http://dx.doi.org/10.1111/1754-9485.12300
Sun J; Barnes M; Dowling J; Menk F; Stanwell P; Greer PB, 2015, 'An open source automatic quality assurance (OSAQA) tool for the ACR MRI phantom', Australasian Physical and Engineering Sciences in Medicine, 38, pp. 39 - 46, http://dx.doi.org/10.1007/s13246-014-0311-8
Journal articles | 2015
Sun J; Dowling J; Pichler P; Menk F; Rivest-Henault D; Lambert J; Parker J; Arm J; Best L; Martin J; Denham JW; Greer PB, 2015, 'MRI simulation: End-to-end testing for prostate radiation therapy using geometric pelvic MRI phantoms', Physics in Medicine and Biology, 60, pp. 3097 - 3109, http://dx.doi.org/10.1088/0031-9155/60/8/3097
Journal articles | 2015
Sun J; Dowling JA; Pichler P; Parker J; Martin J; Stanwell P; Arm J; Menk F; Greer PB, 2015, 'Investigation on the performance of dedicated radiotherapy positioning devices for MR scanning for prostate planning', JOURNAL OF APPLIED CLINICAL MEDICAL PHYSICS, 16, pp. 4 - 13, http://dx.doi.org/10.1120/jacmp.v16i2.4848
Journal articles | 2015
Sun J; Dowling JA; Pichler P; Parker J; Martin J; Stanwell P; Arm J; Menk F; Greer PB, 2015, 'Investigation on the performance of dedicated radiotherapy positioning devices for MR scanning for prostate planning', Journal of Applied Clinical Medical Physics, 16, pp. 4 - 13, http://dx.doi.org/10.1120/jacmp.v16i2.4848
Journal articles | 2015
Walker A; Liney G; Holloway L; Dowling J; Rivest-Henault D; Metcalfe P, 2015, 'Continuous table acquisition MRI for radiotherapy treatment planning: Distortion assessment with a new extended 3D volumetric phantom', Medical Physics, 42, pp. 1982 - 1991, http://dx.doi.org/10.1118/1.4915920
Journal articles | 2015
Whelan B; Kumar S; Dowling J; Begg J; Lambert J; Lim K; Vinod SK; Greer PB; Holloway L, 2015, 'Utilising pseudo-CT data for dose calculation and plan optimization in adaptive radiotherapy', Australasian Physical and Engineering Sciences in Medicine, 38, pp. 561 - 568, http://dx.doi.org/10.1007/s13246-015-0376-z
Journal articles | 2015
2015, 'SP-0021: Generation of density maps for dose calculations from MRI using atlas methods', Radiotherapy and Oncology, 115, pp. S11 - S12, http://dx.doi.org/10.1016/s0167-8140(15)40021-0
Journal articles | 2014
Dowling JA, 2014, 'Opportunities for image analysis in radiation oncology', Australasian Physical and Engineering Sciences in Medicine, 37, pp. 275 - 277, http://dx.doi.org/10.1007/s13246-014-0278-5
Journal articles | 2014
Litjens G; Toth R; van de Ven W; Hoeks C; Kerkstra S; van Ginneken B; Vincent G; Guillard G; Birbeck N; Zhang J; Strand R; Malmberg F; Ou Y; Davatzikos C; Kirschner M; Jung F; Yuan J; Qiu W; Gao Q; Edwards PE; Maan B; van der Heijden F; Ghose S; Mitra J; Dowling J; Barratt D; Huisman H; Madabhushi A, 2014, 'Evaluation of prostate segmentation algorithms for MRI: The PROMISE12 challenge', Medical Image Analysis, 18, pp. 359 - 373, http://dx.doi.org/10.1016/j.media.2013.12.002
Journal articles | 2014
Sun J; Pichler P; Dowling J; Menk F; Stanwell P; Arm J; Greer PB, 2014, 'MR simulation for prostate radiation therapy: Effect of coil mounting position on image quality', British Journal of Radiology, 87, http://dx.doi.org/10.1259/bjr.20140325
Journal articles | 2014
2014, 'Engineering & Physical Sciences in Medicine Conference 2013 Pan Pacific Hotel, Perth, Australia, 3–7 November 2013 Oral presentation abstracts', Australasian Physical & Engineering Sciences in Medicine, 37, pp. 153 - 269, http://dx.doi.org/10.1007/s13246-014-0248-y
Ghose S; Holloway L; Lim K; Chan P; Veera J; Vinod SK; Liney G; Greer PB; Dowling J, 2013, 'A survey of cervix segmentation methods in magnetic resonance images', Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 8198 LNCS, pp. 290 - 298, http://dx.doi.org/10.1007/978-3-642-41083-3_32
Journal articles | 2013
Jameson MG; De Leon J; Windsor AA; Cloak K; Keats S; Dowling JA; Chandra SS; Vial P; Sidhom M; Holloway L; Metcalfe P, 2013, 'Endorectal balloons in the post prostatectomy setting: Do gains in stability lead to more predictable dosimetry?', Radiotherapy and Oncology, 109, pp. 493 - 497, http://dx.doi.org/10.1016/j.radonc.2013.08.024
Journal articles | 2013
Jameson MG; De Leon J; Windsor AA; Cloak K; Keats S; Vial P; Sidhom M; Holloway L; Metcalfe P; Dowling JA; Chandra SS, 2013, 'Endorectal balloons in the post prostatectomy setting: Do gains in stability lead to more predictable dosimetry?', Radiotherapy and Oncology, http://dx.doi.org/10.1016/j.radonc.2013.08.024
Journal articles | 2013
2013, '2012 Engineering and Physical Sciences in Medicine Conference Jupiter's Casino, Gold Coast, 2-6th December 2012 Abstracts', AUSTRALASIAN PHYSICAL & ENGINEERING SCIENCES IN MEDICINE, 36, pp. 65 - 139, http://dx.doi.org/10.1007/s13246-012-0168-7
Journal articles | 2012
Chandra SS; Dowling JA; Shen KK; Raniga P; Pluim JP W; Greer PB; Salvado O; Fripp J, 2012, 'Patient specific prostate segmentation in 3-D magnetic resonance images', IEEE Transactions on Medical Imaging, 31, pp. 1955 - 1964, http://dx.doi.org/10.1109/TMI.2012.2211377
Journal articles | 2012
Dowling JA; Lambert J; Parker J; Salvado O; Fripp J; Capp A; Wratten C; Denham JW; Greer PB, 2012, 'An atlas-based electron density mapping method for magnetic resonance imaging (MRI)-alone treatment planning and adaptive MRI-based prostate radiation therapy', International Journal of Radiation Oncology Biology Physics, 83, http://dx.doi.org/10.1016/j.ijrobp.2011.11.056
Journal articles | 2011
Greer PB; Dowling JA; Lambert JA; Fripp J; Parker J; Denham JW; Wratten C; Capp A; Salvado O, 2011, 'A magnetic resonance imaging-based workflow for planning radiation therapy for prostate cancer', Medical Journal of Australia, 194, http://dx.doi.org/10.5694/j.1326-5377.2011.tb02939.x
Journal articles | 2011
Lambert J; Greer PB; Menk F; Patterson J; Parker J; Dahl K; Gupta S; Capp A; Wratten C; Tang C; Kumar M; Dowling J; Hauville S; Hughes C; Fisher K; Lau P; Denham JW; Salvado O, 2011, 'MRI-guided prostate radiation therapy planning: Investigation of dosimetric accuracy of MRI-based dose planning', Radiotherapy and Oncology, 98, pp. 330 - 334, http://dx.doi.org/10.1016/j.radonc.2011.01.012
2022, '407 A Novel Machine Learning Technique For Detecting Cardiac Substructures In Computed Tomography', in Journal of Cardiovascular Computed Tomography, Elsevier BV, Vol. 16, pp. S4 - S4, http://dx.doi.org/10.1016/j.jcct.2022.06.012
Conference Papers | 2022
2022, 'CSIRO at ImageCLEFmedical Caption 2022', in CEUR Workshop Proceedings, pp. 1455 - 1473
Conference Papers | 2022
2022, 'CSIRO at the ImageCLEFmed 2022 Tuberculosis Caverns Detection Challenge: A 2D and 3D Deep Learning Detection Network Approach', in CEUR Workshop Proceedings, pp. 1626 - 1640
Conference Papers | 2022
2022, 'Local quality assessment of patient specific synthetic-CT via voxel-wise analysis', in 2022 International Conference on Digital Image Computing: Techniques and Applications (DICTA), IEEE, presented at 2022 International Conference on Digital Image Computing: Techniques and Applications (DICTA), 30 November 2022 - 02 December 2022, http://dx.doi.org/10.1109/dicta56598.2022.10034622
Conference Presentations | 2022
2022, 'MO-0889 Validation and clinical impact of a novel hybrid cardiac substructure automatic segmentation method', Vol. 170, pp. S779 - S781, http://dx.doi.org/10.1016/s0167-8140(22)02455-0
Conference Abstracts | 2022
2022, 'OC-0756 Development and implementation of a hybrid method for automatic cardiac substructure segmentation', in Radiotherapy and Oncology, Elsevier BV, Vol. 170, pp. S670 - S672, http://dx.doi.org/10.1016/s0167-8140(22)02662-7
2021, 'AEHRC CSIRO at ImageCLEFmed caption 2021', in CEUR Workshop Proceedings, pp. 1317 - 1328
Conference Papers | 2021
2021, 'Advanced Propulsion as a Cornerstone for Space Exploration and Interstellar Living', in Proceedings of the International Astronautical Congress, IAC
2021, 'Going deeper with brain morphometry using neural networks', in Proceedings - International Symposium on Biomedical Imaging, IEEE, pp. 711 - 715, presented at 2021 IEEE 18th International Symposium on Biomedical Imaging (ISBI), 13 April 2021 - 16 April 2021, http://dx.doi.org/10.1109/ISBI48211.2021.9434039
2021, 'Voxel-wise analysis for spatial characterisation of pseudo-ct errors in MRI-only radiotherapy planning', in Proceedings - International Symposium on Biomedical Imaging, IEEE, pp. 395 - 399, presented at 2021 IEEE 18th International Symposium on Biomedical Imaging (ISBI), 13 April 2021 - 16 April 2021, http://dx.doi.org/10.1109/ISBI48211.2021.9433800
2019, 'A multi-centre study for implementation of MRI-only prostate planning', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, ITALY, Milan, Vol. 133, pp. S224 - S225, presented at 38th Annual Meeting of the European-Society-for-Radiotherapy-and-Oncology (ESTRO), ITALY, Milan, 26 April 2019 - 30 April 2019, http://dx.doi.org/10.1016/S0167-8140(19)30848-5
2019, 'Patient-specific stopping power calibration for proton therapy based on proton radiographic images', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, ITALY, Milan, Vol. 133, pp. S555 - S556, presented at 38th Annual Meeting of the European-Society-for-Radiotherapy-and-Oncology (ESTRO), ITALY, Milan, 26 April 2019 - 30 April 2019, http://dx.doi.org/10.1016/S0167-8140(19)31427-6
Conference Papers | 2019
2019, 'Pseudo-CT generation for mri-only radiotherapy: Comparative study between a generative adversarial network, a u-net network, a patch-based, and an atlas based methods', in Proceedings - International Symposium on Biomedical Imaging, IEEE, Venice, ITALY, pp. 1109 - 1113, presented at 16th IEEE International Symposium on Biomedical Imaging (ISBI), Venice, ITALY, 08 April 2019 - 11 April 2019, http://dx.doi.org/10.1109/ISBI.2019.8759278
Finnegan RN; Dowling JA; Holloway L; Otton J; Koh ES; Luo C; Satchithanandha A; Atluri P; Tang S; Delaney GP; Batumalai V; Thwaites DI, 2018, 'Feasibility of Automatic Multi-Atlas Based Cardiac Segmentation in Planning CT', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, SPAIN, Barcelona, Vol. 127, pp. S1171 - S1172, presented at 37th Meeting of the European-Society-for-Radiotherapy-and-Oncology (ESTRO), SPAIN, Barcelona, 20 April 2018 - 24 April 2018, http://dx.doi.org/10.1016/S0167-8140(18)32436-8
Conference Papers | 2018
Jameson M; Dowling J; Faustino J; Cloak K; Sidhom M; Martin J; De Leon J; Berry M; Pryor D; Holloway L, 2018, 'TRAC: Automated atlas based machine learning QA of contouring accuracy for the PROMETHEUS trial', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, SPAIN, Barcelona, pp. S429 - S430, presented at 37th Meeting of the European-Society-for-Radiotherapy-and-Oncology (ESTRO), SPAIN, Barcelona, 20 April 2018 - 24 April 2018, http://dx.doi.org/10.1016/S0167-8140(18)31133-2
Conference Papers | 2018
2018, 'Can contouring probability maps be a predictor for prostate cancer treatment outcome and toxicity?', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, SPAIN, Barcelona, pp. S1186 - S1187, presented at 37th Meeting of the European-Society-for-Radiotherapy-and-Oncology (ESTRO), SPAIN, Barcelona, 20 April 2018 - 24 April 2018, http://dx.doi.org/10.1016/S0167-8140(18)32459-9
Conference Papers | 2018
2018, 'Comparison of synthetic CT generation algorithms for MRI-only radiation planning in the pelvic region', in 2018 IEEE Nuclear Science Symposium and Medical Imaging Conference, NSS/MIC 2018 - Proceedings, http://dx.doi.org/10.1109/NSSMIC.2018.8824321
Conference Papers | 2018
2018, 'Inter-observer contouring variation of multiple pelvic structures on CT and MR for prostate cancer', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, SPAIN, Barcelona, pp. S869 - S870, presented at 37th Meeting of the European-Society-for-Radiotherapy-and-Oncology (ESTRO), SPAIN, Barcelona, 20 April 2018 - 24 April 2018, http://dx.doi.org/10.1016/S0167-8140(18)31923-6
2017, 'Inter-observer contouring similarity metrics, correlation with treatment outcome for prostate cancer', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, pp. S949 - S949, http://dx.doi.org/10.1016/S0167-8140(17)32260-0
Conference Papers | 2017
2017, 'Pseudo-CT generation by conditional inference random forest for MRI-based radiotherapy treatment planning', in 25th European Signal Processing Conference, EUSIPCO 2017, Kos, Greece, pp. 46 - 50, presented at 2017 25th European Signal Processing Conference (EUSIPCO), Kos, Greece, 28 August 2017 - 02 September 2017, http://dx.doi.org/10.23919/EUSIPCO.2017.8081166
Conference Papers | 2016
2016, 'An atlas based auto-contouring technique incorporating interobserver variation', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, pp. S897 - S897, http://dx.doi.org/10.1016/S0167-8140(16)33147-4
Conference Papers | 2016
2016, 'EPSM 2016, Engineering and Physical Sciences in Medicine : 6-10 November 2016, Sydney, Australia.', in Australas Phys Eng Sci Med, Netherlands, pp. 1045 - 1190, Netherlands, http://dx.doi.org/10.1007/s13246-016-0494-2
Conference Papers | 2015
Ghose S; Mitra J; Karunanithi M; Dowling J, 2015, 'Human Activity Recognition from Smart-Phone Sensor Data using a Multi-Class Ensemble Learning in Home Monitoring', in Studies in Health Technology and Informatics, pp. 62 - 67, http://dx.doi.org/10.3233/978-1-61499-558-6-62
Conference Papers | 2015
Ghose S; Mitra J; Khanna S; Dowling J, 2015, 'An Improved Patient-Specific Mortality Risk Prediction in ICU in a Random Forest Classification Framework', in Studies in Health Technology and Informatics, pp. 56 - 61, http://dx.doi.org/10.3233/978-1-61499-558-6-56
Ghose S; Denham J; Ebert M; Kennedy A; Mitra J; Rose S; Dowling J, 2013, 'Multi-atlas and Gaussian mixture modeling based perirectal fat segmentation from CT images', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 194 - 202, http://dx.doi.org/10.1007/978-3-642-41083-3_22
Conference Papers | 2012
Dimigen M; Vinod S; Borok N; Holloway L; Dowling J; Lim K, 2012, 'The Use of Cervical Cancer MRI Contouring Guidelines in Clinical Practice', in INTERNATIONAL JOURNAL OF RADIATION ONCOLOGY BIOLOGY PHYSICS, ELSEVIER SCIENCE INC, MA, Boston, pp. S433 - S433, presented at 54th Annual Meeting of the American-Society-for-Radiation-Oncology (ASTRO), MA, Boston, 28 October 2012 - 31 October 2012, http://dx.doi.org/10.1016/j.ijrobp.2012.07.1147
Conference Papers | 2012
Whelan B; Kumar S; Dowling J; Lambert J; Lim K; Salvado O; Begg J; Greer P; Vinod S; Holloway L, 2012, 'Requirements for the Accuracy of Electron Density Data Planning for MRI Based Cervix Cancer Treatment Planning', in MEDICAL PHYSICS, AMER ASSOC PHYSICISTS MEDICINE AMER INST PHYSICS, NC, Charlotte, pp. 3694 - 3694, presented at 54th Annual Meeting and Exhibition of the American-Association-of-Physicists-in-Medicine (AAPM), NC, Charlotte, 29 July 2012 - 02 August 2012, http://dx.doi.org/10.1118/1.4735020
Conference Papers | 2012
2012, 'Requirements for the accuracy of electron density data planning for MRI based cervix cancer treatment planning', in Medical Physics, American Association Physicists Medicine American Inst P, Melville, NY, USA, pp. 39 (6):3694-3694; JUN 2012, presented at 55th Annual Meeting of the American Association of Physicists in Medicine, http://dx.doi.org/10.1118/1.4735020
Conference Papers | 2011
Chandra S; Dowling J; Shen K; Pluim J; Greer P; Salvado O; Fripp J, 2011, 'Automatic segmentation of the prostate in 3D magnetic resonance images using case specific deformable models', in Proceedings - 2011 International Conference on Digital Image Computing: Techniques and Applications, DICTA 2011, pp. 7 - 12, http://dx.doi.org/10.1109/DICTA.2011.10
Conference Papers | 2011
Dowling JA; Fripp J; Chandra S; Pluim JP W; Lambert J; Parker J; Denham J; Greer PB; Salvado O, 2011, 'Fast automatic multi-atlas segmentation of the prostate from 3D MR images', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 10 - 21, http://dx.doi.org/10.1007/978-3-642-23944-1_2
Conference Papers | 2011
Lambert J; Dowling J; Menk F; Parker J; Capp A; Denham J; Salvado O; Greer PB, 2011, 'SU‐D‐110‐05: MR‐Based Dose Calculation for Prostate Radiotherapy Using Atlas‐ Based Auto‐Segmentation', in Medical Physics, pp. 3387 - 3388, http://dx.doi.org/10.1118/1.3611541
Conference Papers | 2010
Acosta O; Dowling J; Cazoulat G; Simon A; Salvado O; De Crevoisier R; Haigron P, 2010, 'Atlas based segmentation and mapping of organs at risk from planning CT for the development of voxel-wise predictive models of toxicity in prostate radiotherapy', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 42 - 51, http://dx.doi.org/10.1007/978-3-642-15989-3_6
Conference Papers | 2010
Dowling J; Lambert J; Parker J; Fripp J; Denham JW; Wratten C; Capp A; Tang C; Bourgeat P; Salvado O; Greer PB, 2010, 'Sci—Sat AM(1): Planning — 05: Feasibility of Atlas‐Based Organ Segmentation and Electron Density Mapping for MRI‐Based Prostate Radiation Therapy Planning', in Medical Physics, pp. 3907, http://dx.doi.org/10.1118/1.3476205
Conference Papers | 2010
Dowling J; Lambert J; Parker J; Greer PB; Fripp J; Denham J; Ourselin S; Salvado O, 2010, 'Automatic MRI atlas-based external beam radiation therapy treatment planning for prostate cancer', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 25 - 33, http://dx.doi.org/10.1007/978-3-642-15989-3_4
Dowling J; Bourgeat P; Raffelt D; Fripp J; Greer PB; Patterson J; Denham J; Gupta S; Tang C; Stanwell P; Ourselin S; Salvado O, 2009, 'Nonrigid correction of interleaving artefacts in pelvic MRI', in Progress in Biomedical Optics and Imaging - Proceedings of SPIE, http://dx.doi.org/10.1117/12.812460
Conference Papers | 2008
Dowling J; Planitz BM; Maeder AJ; Du J; Pham B; Boyd C; Chen S; Bradley AP; Crozier S, 2008, 'A comparison of DCT and DWT block based watermarking on medical image quality', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 454 - 466, http://dx.doi.org/10.1007/978-3-540-92238-4_35
Conference Papers | 2008
Maeder A; Dowling J; Nguyen A; Brunton E; Nguyen P, 2008, 'Assuring authenticity of digital mammograms by image watermarking', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 204 - 211, http://dx.doi.org/10.1007/978-3-540-70538-3_29
Conference Papers | 2007
Dowling JA; Planitz BM; Maeder AJ; Jiang D; Pham B; Boyd C; Shaokang C; Bradley AP; Crozier S, 2007, 'Visual quality assessment of watermarked medical images', in Progress in Biomedical Optics and Imaging - Proceedings of SPIE, http://dx.doi.org/10.1117/12.707571
Conference Papers | 2006
Dowling J; Boles W; Maeder A, 2006, 'A display framework for presenting information from a visual prosthesis', in 13th Annual International Conference on Mechatronics and Machine Vision in Practice 2006, pp. 230 - 235
2005, 'Mobility assessment using simulated Artificial Human Vision', in IEEE Computer Society Conference on Computer Vision and Pattern Recognition Workshops, IEEE, presented at 2005 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR'05) - Workshops, http://dx.doi.org/10.1109/CVPR.2005.494
Conference Papers | 2004
Dowling J; Maeder A; Boles W, 2004, 'Mobility enhancement and assessment for a visual prosthesis', in Proceedings of SPIE - The International Society for Optical Engineering, pp. 780 - 791, http://dx.doi.org/10.1117/12.534866